New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1 =0 (0.000)52 (0.860) 39/70 NT 100% intergenic (–/‑189) –/thrL –/thr operon leader peptide
?REL606 = 4629812 0 (0.000)intergenic (+24/–) lasT/– predicted rRNA methyltransferase/–

ATCACCAAATAAAAAACGCCTTAGTAAGTATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/4629777‑4629812
                                   |                                   
atCACCAAATAAAAAACGCCTTAGTAAGTATTTTTc                                     >  1:3093733/1‑36 (MQ=255)
atCACCAAATAAAAAACGCCTTAGTAAGTATTTTTc                                     <  1:5167325/36‑1 (MQ=255)
 tCACCAAATAAAAAACGCCTTAGTAAGTATTTTTCa                                    >  1:2414069‑M2/1‑35 (MQ=255)
   aCCAAATAAAAAACGCCTTAGTAAGTATTTTTCagc                                  >  1:7873690‑M2/1‑33 (MQ=255)
   aCCAAATAAAAAACGCCTTAGTAAGTATTTTTCagc                                  <  1:6776379‑M2/36‑4 (MQ=255)
      aaaTAAAAAACGCCTTAGTAAGTATTTTTCagcttt                               <  1:6870937‑M2/36‑7 (MQ=255)
       aaTAAAAAACGCCTTAGTAAGTATTTTTCagctttt                              <  1:2074422‑M2/36‑8 (MQ=255)
       aaTAAAAAACGCCTTAGTAAGTATTTTTCagctttt                              >  1:4247535‑M2/1‑29 (MQ=255)
        aTAAAAAACGCCTTAGTAAGTATTTTTCagcttttc                             <  1:2936149‑M2/36‑9 (MQ=255)
         tAAAAAACGCCTTAGTAAGTATTTTTCagcttttca                            <  1:1154262‑M2/36‑10 (MQ=255)
         tAAAAAACGCCTTAGTAAGTATTTTTCagcttttca                            >  1:2497792‑M2/1‑27 (MQ=255)
          aaaaaaCGCCTTAGTAAGTATTTTTCagcttttcat                           >  1:3336834‑M2/1‑26 (MQ=255)
          aaaaaaCGCCTTAGTAAGTATTTTTCagcttttcat                           >  1:2621128‑M2/1‑26 (MQ=255)
           aaaaaCGCCTTAGTAAGTATTTTTCagcttttcatt                          <  1:6936008‑M2/36‑12 (MQ=255)
            aaaaCGCCTTAGTAAGTATTTTTCagcttttcattc                         >  1:3275486‑M2/1‑24 (MQ=255)
            aaaaCGCCTTAGTAAGTATTTTTCagcttttcattc                         >  1:5416424‑M2/1‑24 (MQ=255)
            aaaaCGCCTTAGTAAGTATTTTTCagcttttcattc                         <  1:659973‑M2/36‑13 (MQ=255)
             aaaCGCCTTAGTAAGTATTTTTCagcttttcattct                        <  1:7782424‑M2/36‑14 (MQ=255)
              aaCGCCTTAGTAAGTATTTTTCagcttttcattctg                       >  1:277519‑M2/1‑22 (MQ=255)
               aCGCCTTAGTAAGTATTTTTCagcttttcattctga                      <  1:1060733‑M2/36‑16 (MQ=255)
                cGCCTTAGTAAGTATTTTTCagcttttcattctgac                     >  1:143258‑M2/1‑20 (MQ=255)
                 gCCTTAGTAAGTATTTTTCagcttttcattctgact                    >  1:967095‑M2/1‑19 (MQ=255)
                 gCCTTAGTAAGTATTTTTCagcttttcattctgact                    <  1:1225321‑M2/36‑18 (MQ=255)
                 gCCTTAGTAAGTATTTTTCagcttttcattctgact                    <  1:2321554‑M2/36‑18 (MQ=255)
                 gCCTTAGTAAGTATTTTTCagcttttaattctgact                    >  1:3739542‑M2/1‑19 (MQ=255)
                   cTTAGTAAGTATTTTTCagcttttcattctgactgc                  >  1:313858‑M2/1‑17 (MQ=255)
                   cTTAGTAAGTATTTTTCagcttttcattctgactgc                  >  1:4927969‑M2/1‑17 (MQ=255)
                    ttAGTAAGTATTTTTCagcttttcattctgactgca                 >  1:6426364‑M2/1‑16 (MQ=255)
                    ttAGTAAGTATTTTTCagcttttcattctgactgca                 <  1:7210572‑M2/36‑21 (MQ=255)
                     tAGTAAGTATTTTTCagcttttcattcttactgcaa                <  1:4784943‑M2/36‑22 (MQ=255)
                     tAGTAAGTATTTTTCagcttttcattctgacttcaa                <  1:7138069‑M2/36‑22 (MQ=255)
                     tAGTAAGTATTTTTCagcttttcattctgactgcaa                >  1:1867431‑M2/1‑15 (MQ=255)
                     tAGTAAGTATTTTTCagcttttcattctgactgcaa                >  1:2652243‑M2/1‑15 (MQ=255)
                       gtaagtaTTTTTCagcttttcattctgactgcaacg              <  1:2954429‑M2/36‑24 (MQ=255)
                       gtaagtaTTTTTCagcttttcattctgactgcaacg              <  1:2873608‑M2/36‑24 (MQ=255)
                       gtaagtaTTTTTCagcttttcattctgactgcaacg              <  1:6230759‑M2/36‑24 (MQ=255)
                        taagtaTTTTTCagcttttcattctgactgcaacgg             >  1:6040355‑M2/1‑12 (MQ=255)
                         aagtaTTTTTCagcttttcattctgactgcaacggg            <  1:6213186‑M2/36‑26 (MQ=255)
                          agtaTTTTTCagcttttcattctgactgcaacgggc           >  1:679143‑M2/1‑10 (MQ=255)
                           gtaTTTTTCagcttttcattctgactgcaatgggca          <  1:7344457‑M2/36‑28 (MQ=255)
                           gtaTTTTTCagcttttcattctgactgcaacgggca          >  1:2746342‑M2/1‑9 (MQ=255)
                           gtaTTTTTCagcttttcattctgactgcaacgggca          <  1:1448631‑M2/36‑28 (MQ=255)
                            taTTTTTCagcttttcattctgactgcaacgggcaa         <  1:7064917‑M2/36‑29 (MQ=255)
                             aTTTTTCagcttttcattctgactgcaacgggcaat        >  1:5226978‑M2/1‑7 (MQ=255)
                              tttttCagcttttcattctgactgcaacgggcaata       <  1:6432930‑M2/36‑31 (MQ=255)
                              tttttCagcttttcattctgactgcaacgggcaata       >  1:477686‑M2/1‑6 (MQ=255)
                               ttttCagcttttcattctgactgcaacgggcaatat      <  1:1161969‑M2/36‑32 (MQ=255)
                                tttCagcttttcattctgactgcaacgggcaatatg     <  1:1237781‑M2/36‑33 (MQ=255)
                                tttCagcttttcattctgactgcaacgggcaatatg     <  1:3387852‑M2/36‑33 (MQ=255)
                                  tCagcttttcattctgactgcaacgggcaatatgtc   >  1:6166178‑M2/1‑2 (MQ=255)
                                  tCagcttttcattctgactgcaacgggcaatatgtc   >  1:7266585‑M2/1‑2 (MQ=255)
                                  tCagcttttcattctgactgcaacgggcaatatgtc   <  1:1168971‑M2/36‑35 (MQ=255)
                                  tCagcttttcattctgactgcaacgggcaatatgtc   >  1:830192‑M2/1‑2 (MQ=255)
                                   cagcttttcattctgactgcaacgggcaatatgtct  >  1:837103‑M2/1‑1 (MQ=255)
                                   |                                   
ATCACCAAATAAAAAACGCCTTAGTAAGTATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/4629777‑4629812

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 30 ≤  ATCG  < 35 ≤  ATCG  < 37 ≤  ATCG