New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 308482 =45 (0.740)9 (0.150) 6/70 NT 19.8% coding (554/606 nt) yahD predicted transcriptional regulator with ankyrin domain
?REL606 1580990 = 28 (0.460)coding (757/1389 nt) yneI predicted aldehyde dehydrogenase

CGATAAATATGGCAAAACGCCACTGGAACTGGCGCGGGAACGGGGCTTTGAAGAGATTGCGCAGTTACTGA  >  REL606/308447‑308517
                                   |                                   
cGATAAATATGGCAAAACGCCACGGGAACTGGcgcg                                     <  1:5794453/36‑1 (MQ=255)
 gATAAATATGGCAAAACGCCACTGGAACTGGCGCgg                                    <  1:2363317/36‑1 (MQ=255)
 attgtgcttaacgatgccgatctggaactggcgggg                                    <  1:4244066‑M1/2‑1 (MQ=255)
 attgtgcttaacgatgccgatctggaactggcgggg                                    <  1:2326155‑M1/2‑1 (MQ=255)
  ttgtgcttaacgatgccgatctggaactggcggggg                                   <  1:6447038‑M1/3‑1 (MQ=255)
  aTAAATATGGCAAAACGCCACTGGAACTGGCGCggg                                   <  1:5718042/36‑1 (MQ=255)
   tgtgcttaacgatgccgatctggaactggcggGGGa                                  <  1:2041277‑M1/4‑1 (MQ=255)
   tgtgcttaacgatgccgatctggaactggcggAGGa                                  <  1:6442487‑M1/4‑1 (MQ=255)
   tAAATATGGCAGAACGCGACTGGAACTGGCGCGGGa                                  <  1:431575/36‑1 (MQ=21)
   tAAATATGGCAAAACGCCACTGGAACTGGCGCGGGa                                  >  1:1329161/1‑36 (MQ=255)
    gtgcttaacgatgccgatctggaactggcggGGGaa                                 <  1:1470426‑M1/5‑1 (MQ=255)
    aaaTATGGCAAAAAGTCACTGGGACGGGCGCGGGaa                                 >  1:1749184/1‑36 (MQ=19)
     aaTATGGCAAAACGCCACTGGAACTGGCGCGGGAAc                                >  1:5482396/1‑36 (MQ=255)
      atatGGCAAAACGCCACTGGAACTGGCGCGGGAACg                               <  1:3060772/36‑1 (MQ=255)
       tatGGCAAAACGCCACTGGAACTGGCGCGGGAACgg                              >  1:4115610/1‑36 (MQ=255)
        ttaacgatgccgatctggaactggcggGGGAAGggg                             <  1:6984931‑M1/9‑1 (MQ=255)
        ttaacgatgccgatctggaactggcggGGGAAGggg                             <  1:2748836‑M1/9‑1 (MQ=255)
        atGGCAAAACGCCACTGGAACGGGCGCGGGAACggg                             <  1:432147/36‑1 (MQ=255)
         taacgatgccgatctggaactggcggGGGAAGgggg                            <  1:942449‑M1/10‑1 (MQ=255)
          ggCAAAACGCCACTGGAACTGGCGCGGGAACGGGGc                           <  1:7139393/36‑1 (MQ=255)
          ggCAAAACGCCACTGGAACTGGCGCGGGAACGGGGc                           <  1:2577177/36‑1 (MQ=255)
          ggCAAAACGCCACTGGAACTGGCGCGGGAACGGGGc                           >  1:4612862/1‑36 (MQ=255)
           gCAAAACGCCACTGGAACTGGCGCGGGAACGGGGCt                          <  1:1350807/36‑1 (MQ=255)
            cAAAACGCCACTGGAACTGGCGCGGGAACGGGGCtt                         >  1:1657669/1‑36 (MQ=255)
             aaaaCGCCACTGGAACTGGCGCGGGAACGGGGCttt                        >  1:4568825/1‑36 (MQ=255)
             aaaaCGCCACTGGAACTGGCGCGGGAACGGGGCttt                        <  1:7429047/36‑1 (MQ=255)
             aaaaCGCCACTGGAACTGGCGCGGGAACGGGGCttt                        <  1:1587945/36‑1 (MQ=255)
                 cGCCACTGGAACTGGCGCGGGAACGGGGCTTTGAag                    <  1:955194/36‑1 (MQ=255)
                 cGCCACTGGAACTGGCGCGGGAACGGGGCTTTGAag                    <  1:4136403/36‑1 (MQ=255)
                  gCCACTGGAACTGGCGCGGGAACGGGGCTTTGAaga                   <  1:1023255/36‑1 (MQ=255)
                  gCCACTGGAACTGGCGCGGGAACGGGGCTTTGAaga                   >  1:7590788/1‑36 (MQ=255)
                  gCCACTGGAACTGGCGCGGGAACGGGGCTTTGAaga                   <  1:5298638/36‑1 (MQ=255)
                    cACTGGAACTGGCGCGGGAACGGGGCTTTGAAgaga                 >  1:6357391/1‑36 (MQ=255)
                     aCTGGAACTGGCGCGGGAACGGGGCTTTGAAGAGAt                >  1:1913685/1‑36 (MQ=255)
                      cTGGAACTGGCGCGGGAACGGGGCTTTGAAGAGAtt               <  1:6048317/36‑1 (MQ=255)
                        ggAACTGGCGCGGGAACGGGGCTTTGAAGAGATTgc             >  1:3855032/1‑36 (MQ=255)
                        ggAACTGGCGCGGGAACGGGGCTTTGAAGAGATTgc             <  1:7129842/36‑1 (MQ=255)
                        ggAACTGGCGCGGGAACGGGGCTTTGAAGAGATTgc             <  1:5344569/36‑1 (MQ=255)
                         taaCTGGCGCGGGAACGGGGCTTTGAAGAGATTgcg            <  1:2025693/35‑1 (MQ=255)
                         gAACTGGCGCGGGAACGGGGCTTTGAAGAGATTgcg            <  1:5536889/36‑1 (MQ=255)
                         gAACTGGCGCGGGAACGGGGCTTTGAAGAGATTgcg            >  1:1147820/1‑36 (MQ=255)
                         gAACTGGCGCGGGAACGGGGCTTTGAAGAGATTgcg            >  1:6739972/1‑36 (MQ=255)
                          aaCTGGCGCGGGAACGGGGCTTTGAAGAGATTgcgc           >  1:3359212/1‑36 (MQ=255)
                          aaCTGGCGCGGGAACGGGGCTTTGAAGAGATTgcgc           <  1:5351504/36‑1 (MQ=255)
                          aaCTGGCGCGGGAACGGGGCTTTGAAGAGATTgcgc           >  1:1977979/1‑36 (MQ=255)
                           aCTGGCGCGGGAACGGGGCTTTGAAGAGATTGCGCa          <  1:5794142/36‑1 (MQ=255)
                           aCTGGCGCGGGAACGGGGCTTTGAAGAGATTGCGCa          <  1:6434686/36‑1 (MQ=255)
                            cTGGCGCGGGAACGGGGCTTTGAAGAGATTGCGCAg         >  1:3150613/1‑36 (MQ=255)
                             tGGCGCGGGAACGGGGCTTTGAAGAGATTGCGCAGt        <  1:1826736/36‑1 (MQ=255)
                             tGGCGCGGGAACGGGGCTTTGAAGAGATTGCGCAGt        <  1:1058030/36‑1 (MQ=255)
                               gcgcGGGAACGGGGCTTTGAAGAGATTGCGCAGTTa      <  1:2794355/36‑1 (MQ=255)
                                cgcgGGAACGGGGCTTTGAAGAGATTGCGCAGTTAc     >  1:3166824/1‑36 (MQ=255)
                                 gcgGGAACGGGGCTTTGAAGAGATTGCGCAGTTACt    <  1:4997860/36‑1 (MQ=255)
                                 gagggAACGGGGCTTTGAAGAGATTGCGCAGTTACt    >  1:1942896/3‑36 (MQ=255)
                                  cgGGAACGGGGCTTTGAAGAGATTGCGCAGTTACTg   <  1:5386670/36‑1 (MQ=255)
                                   gggAACGGGGCTTTGAAGAGATTGCGCAGTTACTGa  >  1:2849424/1‑36 (MQ=255)
                                   |                                   
CGATAAATATGGCAAAACGCCACTGGAACTGGCGCGGGAACGGGGCTTTGAAGAGATTGCGCAGTTACTGA  >  REL606/308447‑308517

Base quality scores:  ATCG  < 3 ≤  ATCG  < 13 ≤  ATCG  < 25 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG