New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1619529 | 28 (0.570) | 6 (0.120) | 4/60 | NT | 20.7% | intergenic (‑138/+79) | rem/hokD | predicted protein/small toxic polypeptide |
? | REL606 | 1946064 = | 18 (0.310) | coding (144/390 nt) | cheY | chemotaxis regulator transmitting signal to flagellar motor component |
GAACTTCAAACGCGTTGAAAATAAAAACAAAAACCCGCC................................. > REL606/1619491‑1619529
..................................CCGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATC > REL606/1946064‑1946096
AAACAAAAACCCGCCTGCCTGCAACTTATTGAGAGC < 1:5596001/36‑1 (MQ=255)
AACAAAAACCCGCCTGCCTGCAACTTATTGAGAGCG < 1:5703673/36‑1 (MQ=255)
AAAAACCGCCTGCCTGCAACTTATTGAGAGCGTCGA < 1:5952449/36‑1 (MQ=255)
AACCCGCCTGCCTGCAACTTATTGAGAGCGTCGACG < 1:2188979/36‑1 (MQ=255)
ACCCGCCTGCCTGCAACTTATTGAGAGCGTCGACGC < 1:4967839/36‑1 (MQ=255)
ACCCGCCTGCCTGCAACTTATTGAGAGCGTCGACGC < 1:5792264/36‑1 (MQ=255)
GAACTTCAAACGCGTTGAAAATAAAAACAAAAACCCGCC................................. > REL606/1619491‑1619529
..................................CCGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATC > REL606/1946064‑1946096
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 7 ≤
ATCG
< 19 ≤
ATCG
< 30 ≤
ATCG
< 37 ≤
ATCG
|