New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1370723 | 39 (0.880) | 4 (0.090) | 3/54 | NT | 11.9% | coding (447/1293 nt) | ycjN | predicted sugar transporter subunit: periplasmic‑binding component of ABC superfamily |
? | REL606 | = 2574504 | 20 (0.350) | intergenic (+346/+472) | sseA/sseB | 3‑mercaptopyruvate sulfurtransferase/rhodanase‑like enzyme, sulfur transfer from thiosulfate |
TAGCGCATGGACCGGTGTTCCTGTCAGCGCCTGGATTGGCGGT.......... > REL606/1370681‑1370723
...................................TTGGCGGTTTTTTGTTTT < REL606/2574504‑2574495
GGTGTTCCTGTCAGCGCCTGGATTGGCGGTTTTTTG > 1:7481674/1‑36 (MQ=255)
TGTTCCTGTCAGCGCCTGGATTGGCGGTTTTTTGTT > 1:2106023/1‑36 (MQ=255)
TGTTCCTGTCAGCGCCTGGATTGGCGGTTTTTTGTT > 1:5297582/1‑36 (MQ=255)
TTCCTGTCAGCGCCTGGATTGGCGGTTTTTTTTTTT > 1:658524/1‑36 (MQ=255)
TAGCGCATGGACCGGTGTTCCTGTCAGCGCCTGGATTGGCGGT.......... > REL606/1370681‑1370723
...................................TTGGCGGTTTTTTGTTTT < REL606/2574504‑2574495
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 6 ≤
ATCG
< 13 ≤
ATCG
< 27 ≤
ATCG
< 37 ≤
ATCG
|