Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC REL606 547,700 Δ8,224 bp 100% IS1‑mediated [nmpC][ECB_00513] [nmpC], ybcR, ybcS, ybcT, ybcU, ECB_00510, nohB, ECB_00512, [ECB_00513]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 546959–547702 555923–555878 8177–8965 8 [7] [0] 66 [insB‑6]–[ECB_00513] [insB‑6], insA‑6, nmpC, ybcR, ybcS, ybcT, ybcU, ECB_00510, nohB, ECB_00512, [ECB_00513]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 555924 =0 (0.000)41 (1.030) 27/62 NT 100% coding (1209/2346 nt) ECB_00513 conserved hypothetical protein
?REL606 = 2035093 NA (NA)noncoding (1/768 nt) IS1 repeat region

ACCGAAACCGGTAATGACTCCAACTTATTGATAGTGTTTTA  >  REL606/546923‑546963
                                   |     
accgaaaccgGCAATGACTCCAACTTATTGATAgtg       >  1:3412957/1‑36 (MQ=255)
 ccgaaaccgGTAATGACTCCAACTTATTGATAgtgt      <  1:5870094/36‑1 (MQ=255)
  cgaaaccgGTAATGACTCCAACTTATTGATAGTGtt     <  1:2202507/36‑1 (MQ=255)
  cgaaaccgGTAATGACTCCAACTTATTGATAGTGtt     >  1:3963794/1‑36 (MQ=255)
   gaaaccgGTAATGACTCCAACTTATTGATAGTGttt    <  1:4815244/36‑1 (MQ=40)
    aaaccgGTAATGACTCCAACTTATTGATAGTGtttt   <  1:5491792/36‑1 (MQ=38)
     aaccgGTAATGACTCCAACTTATTGATAGTGTTTTa  <  1:2729373/36‑1 (MQ=35)
     aaccgGTAATGACTCCAACTTATTGATAGTGTTTTa  <  1:2784341/36‑1 (MQ=35)
                                   |     
ACCGAAACCGGTAATGACTCCAACTTATTGATAGTGTTTTA  >  REL606/546923‑546963

Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 22 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG