New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2886167 | 47 (0.950) | 6 (0.120) | 4/56 | NT | 13.3% | coding (68/2259 nt) | xdhA | xanthine dehydrogenase, molybdenum binding subunit |
? | REL606 | 3650766 = | 31 (0.500) | intergenic (+47/+140) | cspA/hokA | major cold shock protein/toxic polypeptide, small |
CACCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGG.................................. > REL606/2886126‑2886167
...................................TGGCGGGGATTTTTTTATTTGTTTTCAGGAAATAAATAATC > REL606/3650766‑3650799
CGGGCACGATATACTGACGATTATGTTATGGCGGGG > 1:7560246/1‑36 (MQ=255)
GGGCACGATATACTGACGATTATGTTATGGCGGGGg > 1:448471/1‑35 (MQ=255)
GGGCACGATATACTGACGATTATGTTATGGCGGGGc > 1:106900/1‑35 (MQ=255)
CGATATACTGACGATTATGTTATGGCGGGGGTTTTT > 1:6708099/1‑36 (MQ=255)
ATATACTGACGATTATGTTATGGCGGGGAGTTTTTT > 1:6641227/1‑36 (MQ=255)
TACTGACGATTATGTTATGGCGGGGATTTTTTTTTT > 1:2043834/1‑36 (MQ=255)
CACCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGG.................................. > REL606/2886126‑2886167
...................................TGGCGGGGATTTTTTTATTTGTTTTCAGGAAATAAATAATC > REL606/3650766‑3650799
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 4 ≤
ATCG
< 13 ≤
ATCG
< 29 ≤
ATCG
< 37 ≤
ATCG
|