Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 1,733,647 IS150 (–) +3 bp 18.4% coding (683‑685/1413 nt) pykF → pyruvate kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 588495 =NA (NA)9 (0.180) 9/62 NT 20.9% noncoding (1/1977 nt) IS150 repeat region
?REL606 1733647 = 34 (0.680)coding (683/1413 nt) pykF pyruvate kinase
* ? REL606 = 666130NA (NA)7 (0.130) 7/68 NT 15.9% noncoding (1443/1443 nt) IS150 repeat region
?REL606 = 1733649 37 (0.640)coding (685/1413 nt) pykF pyruvate kinase

AACTGTCCAACTTTTTGGGGTCAGTACAT...................................  >  REL606/666103‑666130
............................TGTTGAGGCCTTCCTGGTTTTCGATTTTGGAGATGA  <  REL606/1733649‑1733614
                                                                
AACTGTCCAACTTTTTGGGGTCAGTACATGTTGAGG                              <  1:5148641/36‑1 (MQ=255)
   TGTCCAACTTTTTGGGGTCAGTACATGTTGAGGCCT                           >  1:3843735/1‑36 (MQ=255)
    GTCCAACTTTTTGGGGTCAGTACATGTTGAGGCCTT                          <  1:1608468/36‑1 (MQ=255)
         ACTTTTTGGGGTCAGTACATGTTGAGGCCTTCCTGG                     >  1:3884384/1‑36 (MQ=255)
             TTTGGGGTCAGTACATGTTGAGGCCTTCCTGGTTTT                 >  1:2674145/1‑36 (MQ=255)
                      AGTACATGTTGAGGCCTTCCTGGTTTTCGATTTTGG        >  1:7398551/1‑36 (MQ=255)
                           ATGTTGAGGCCTTCCTGGTTTTCGATTTTGGAGATG   >  1:7228221/1‑36 (MQ=255)
                                                                
AACTGTCCAACTTTTTGGGGTCAGTACAT...................................  >  REL606/666103‑666130
............................TGTTGAGGCCTTCCTGGTTTTCGATTTTGGAGATGA  <  REL606/1733649‑1733614

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 22 ≤  ATCG  < 29 ≤  ATCG  < 37 ≤  ATCG