New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1286707 =25 (0.480)6 (0.120) 3/60 NT 18.8% intergenic (+31/‑152) narI/ECB_01206 nitrate reductase 1, gamma (cytochrome b(NR)) subunit/hypothetical protein
?REL606 = 3571661 27 (0.440)coding (110/1470 nt) yhiP predicted transporter

ATAAAAAAACCCCGCC..................................  <  REL606/1286722‑1286707
...........CCGCCAGTACGCCCTGCACGCCGTAGTAGCCGAATCGCT  <  REL606/3571661‑3571628
                                                  
aaAAAAAAACCCCGCCAGTACGCCCTGCACGCCGTA                <  1:1880153/34‑1 (MQ=17)
 aAAAAAAAACCCGCCAGTACGCCCTGCACGCCGTAG               <  1:2116651/35‑1 (MQ=255)
  AAAAAAACCCCGCCAGTACGCCCTGCACGCCGTAGT              <  1:4072029/36‑1 (MQ=32)
   AAAAAACCCCGCCAGTACGCCCTGCACGCCGTAGTA             <  1:6188374/36‑1 (MQ=1)
      AAACCCCGCCAGTACGCCCTGCACGCCGTAGTAGCC          <  1:2927501/36‑1 (MQ=1)
      AAAACCCGCCAGTACGCCCTGCACGCCGTAGTAGCC          <  1:2254335/36‑1 (MQ=0)
                                                  
ATAAAAAAACCCCGCC..................................  <  REL606/1286722‑1286707
...........CCGCCAGTACGCCCTGCACGCCGTAGTAGCCGAATCGCT  <  REL606/3571661‑3571628

Base quality scores:  ATCG  < 3 ≤  ATCG  < 10 ≤  ATCG  < 19 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG