Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | REL606 | 683,496 | A→C | 100% | V65G (GTT→GGT) | nagC ← | DNA‑binding transcriptional dual regulator, repressor of N‑acetylglucosamine |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | REL606 | 683,496 | 0 | A→C | 100.0% | 39.5 | 12 | 194 | nagC | DNA‑binding transcriptional dual regulator, repressor of N‑acetylglucosamine |
Reads supporting (aligned to +/- strand): new base (11/1): ref base (0/0): total (11/1) |
GCGGCCCCCAGTGGAGGCCTGCTGATCAACCTCTTTGATCAGCCCGCGTTCGATAAGCTGA > REL606/683468‑683528
|
gcggaCCCCAGTGGAGGCCTGCTGATAACCCTAttt > 1:2148380/1‑36 (MQ=16)
cggcCCCCAGTGGAGGCCTGCTGATCACCCTCTTTg < 1:1973866/36‑1 (MQ=255)
ccccAGTGGAGGCCTGCTGATCACCCTCTTTGATCa > 1:5527741/1‑36 (MQ=255)
cccAGTGGAGGCCTGCTGATCACCCTCTTTGATCAg > 1:158635/1‑36 (MQ=255)
gTGGAGGCCTGCTGATCACCCTCTTTGATCAGCCcg > 1:1817326/1‑36 (MQ=255)
ccTGCTGATCACCCTCTTTGATCAGCCCGCGTTCGa > 1:3208381/1‑36 (MQ=255)
ccTGCTGATCACCCTCTTTGATCAGCCCGCGTTCGa > 1:3653383/1‑36 (MQ=255)
tgctgATCACCCTCTTTGATCAGCCCGCGTTCGaga > 1:103037/1‑34 (MQ=37)
gctgATCACCCTCTTTGATCAGCCCGCGTTCGATaa > 1:1313766/1‑36 (MQ=255)
gctgATCACCCTCTTTGATCAGCCCGCGTTCGATaa > 1:4312432/1‑36 (MQ=255)
gATCACCCTCTTTGATCAGCCCGCGTTCGATAAGCt > 1:5076272/1‑36 (MQ=255)
tCACCCTCTTTGATCAGCCCGCGTTCGATAAGTTGa > 1:368286/1‑36 (MQ=37)
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GCGGCCCCCAGTGGAGGCCTGCTGATCAACCTCTTTGATCAGCCCGCGTTCGATAAGCTGA > REL606/683468‑683528
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 10 ≤
ATCG
< 16 ≤
ATCG
< 27 ≤
ATCG
< 37 ≤
ATCG
|