New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1241877 =37 (0.750)8 (0.160) 3/56 NT 19.5% coding (345/1737 nt) ycgO potassium/proton antiporter
?REL606 = 4081036 29 (0.470)intergenic (+124/‑136) sodA/kdgT superoxide dismutase, Mn/2‑keto‑3‑deoxygluconate permease

ATCACCTCTGGTTTAACCGGCATGATGGCGGCGTGGCTGTTT...................................  <  REL606/1241918‑1241877
...................................GCTGTTTTATTTTTATCGGATCATTGTTTTTATTTTGAAATT  <  REL606/4081036‑4081002
                                                                             
        TGGTTTAACCGGCATGATGGCGGCGTGGCTGTTTTA                                   >  1:6788997/1‑36 (MQ=255)
           TTTAACCGGCATGATGGCGGCGTGGCTGTTTTATct                                >  1:2582208/1‑34 (MQ=255)
              AACCGGCATGATGGCGGCGTGGCTGTTTTATTTTTt                             >  1:5703257/1‑35 (MQ=255)
              AACCGGCATGATGGCGGCGTGGCTGTTTTATTTTTA                             >  1:6209660/1‑36 (MQ=255)
              AACCGGCATGATGGCGGCGTGGCTGTTTTATTTTTA                             >  1:986090/1‑36 (MQ=255)
              AACCGGCATGATGGCGGCGTGGCTGTTTTATCTTTt                             >  1:5125927/1‑35 (MQ=255)
               ACCGGCATGATGGCGGCGTGGCTGTTTTATTTTTAT                            >  1:3042008/1‑36 (MQ=255)
                 CGGCATGATGGCGGCGTGGCTGTTTTATTTTTATtt                          >  1:8142531/1‑34 (MQ=255)
                                                                             
ATCACCTCTGGTTTAACCGGCATGATGGCGGCGTGGCTGTTT...................................  <  REL606/1241918‑1241877
...................................GCTGTTTTATTTTTATCGGATCATTGTTTTTATTTTGAAATT  <  REL606/4081036‑4081002

Base quality scores:  ATCG  < 3 ≤  ATCG  < 4 ≤  ATCG  < 15 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG