Predicted mutation
evidence seq id position mutation freq annotation gene description
RA REL606 2,082,685 G→A 100% A494V (GCT→GTT)  yegI ← hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6062,082,6850G→A100.0% 115.4 331481yegIhypothetical protein
Reads supporting (aligned to +/- strand):  new base (16/16):  ref base (0/0):  total (16/17)

CGTTCCCTTGCGGTGTCGTGAAGTGCTGCCAGAGCACGTTTTTCTTCCTCCGGTAACCCGAGCATT  >  REL606/2082652‑2082717
                                 |                                
cGTTCCCTTGCGGTGTCGTGAAGTGCTGCCAGAACa                                <  1:2151421/36‑1 (MQ=255)
cGTTCCCTTGCGGTGTCGTGAAGTGCTGCCAGAACa                                >  1:2284382/1‑36 (MQ=255)
 gTTCCCTTGCGGTGTCGTGAAGTGCTGCCAGAACAc                               <  1:5391627/36‑1 (MQ=255)
  ttCCCTTGCGGTGTCGTGAAGTGCTGCCAGAACACg                              >  1:5182835/1‑36 (MQ=255)
   tCCCTTGCGGTGTCGTGAAGTGCTGCCAGAACACGt                             <  1:1615674/36‑1 (MQ=255)
    cccTTGCGGTGTCGTGAATTGCTGCCAGAACACGtt                            <  1:782705/36‑1 (MQ=37)
    cccGTGCGGTGTCGTGAAGTGCTGCCAGAACACGtt                            <  1:1054155/36‑1 (MQ=37)
      cTTGCGGTGTCGTGAAGTGCTGCCAGAACACGtttt                          <  1:1573653/36‑1 (MQ=255)
        tGCGGTGTCGTGAAGTGCTGCCAGAACACGTTTttc                        <  1:1677061/36‑1 (MQ=255)
        tGCGGTGTCGTGAAGTGCTGCCAGAACACGTTTttc                        <  1:4248783/36‑1 (MQ=255)
        tGCGGTGTCGTGAAGTGCTGCCAGAACACGTTTttc                        >  1:4143104/1‑36 (MQ=255)
         gCGGTGTCGTGAAGTGCTGCCAGAACACGTTTttct                       <  1:1225115/36‑1 (MQ=255)
          cGGTGTCGTGAAGTGCTGCCAGACCACGTTTttctt                      <  1:1899564/36‑1 (MQ=255)
          cGGTGTCGTGAAGTGCTGCCAGAACCCGTTTttctt                      <  1:868096/36‑1 (MQ=37)
          cGGTGTCGTGAAGTGCTGCCAGAACACGTTTttctt                      >  1:3083206/1‑36 (MQ=255)
          cGGTGTCGTGAAGTGCTGCCAGAACACGTTTttctt                      <  1:5603302/36‑1 (MQ=255)
          cGGTGTCGTGAAGTGCTGCCAGAACACGTTTttctt                      <  1:4002075/36‑1 (MQ=255)
           ggTGTCGTGAAGTGCTGCCAGAACACGTTTttcttc                     <  1:660035/36‑1 (MQ=255)
               tCGTGAAGTGCTGCCAGAACACGTTTTTCTtcctcc                 >  1:3407727/1‑36 (MQ=255)
                 gTGAAGTGCTGCCAGAACACGTTTTTTGTCCTCCgg               >  1:3492481/1‑36 (MQ=25)
                 gTGAAGTGCTGCCAGAACACGTTTTTCTTCCTCCgg               >  1:4824381/1‑36 (MQ=255)
                  tGAAGTGCTGCCAGAACACGTTTTTCTTCCTCCGGt              <  1:302253/36‑1 (MQ=255)
                    aaGTGCTGCCAGAACACGTTTTTCTTCCTCCGGTaa            >  1:37031/1‑36 (MQ=255)
                    aaGTGCTGCCAGAACACGTTTTTCTTCCTCCGGTaa            >  1:839611/1‑36 (MQ=255)
                     aGTGCTGCCAGAACACGTTTTTCTTCCTCCGGTAAc           <  1:2169515/36‑1 (MQ=255)
                     aGTGCTGCCAGAACACGTTTTTCTTCCTCCGGTAAc           >  1:5283510/1‑36 (MQ=255)
                       tgctgcCAGAACACGTTTTTCTTCCTCCGGTAAccc         >  1:1170542/1‑36 (MQ=255)
                        gctgcCAGAACACGTTTTTCTTCCTCCGGTAACCCg        >  1:4462221/1‑36 (MQ=255)
                        gctgcCAGAACACGTTTTTCTTCCTCCGGTAACCCg        >  1:1810422/1‑36 (MQ=255)
                           gcCAGAACACGTTTTTCTTCCTCCGGTAACCCGAgt     >  1:2406358/1‑35 (MQ=255)
                           gcCAGAACACGTTTTTCTTCCTCCGGTAACCCGAGc     <  1:2055800/36‑1 (MQ=255)
                           gcCAGAACACGTTTTTCTTCCTCCGGTAACCCGAGc     >  1:1165828/1‑36 (MQ=255)
                            ccAGAACACGTTTTTCTTCCTCCGGTAACCCGAGCa    >  1:3965859/1‑36 (MQ=255)
                              agaaCACGTTTTTATTACTCCGGAAACCCGAGCAtt  >  1:4882118/1‑36 (MQ=16)
                                 |                                
CGTTCCCTTGCGGTGTCGTGAAGTGCTGCCAGAGCACGTTTTTCTTCCTCCGGTAACCCGAGCATT  >  REL606/2082652‑2082717

Base quality scores:  ATCG  < 3 ≤  ATCG  < 13 ≤  ATCG  < 21 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG