Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC REL606 3,894,997 Δ6,934 bp 100% IS150‑mediated rbsD[yieO] rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 3894997 3901930 6934 27 [3] [0] 25 rbsD–[yieO] rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 3894996NA (NA)24 (0.580) 18/64 NT 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 3901931 = 0 (0.000)coding (489/1428 nt) yieO predicted multidrug or homocysteine efflux system

GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAG...................................  >  REL606/3894963‑3894996
................................CAGGTTGCCCAGGTGACCAGCACGCCGCCAAGAACGGG  >  REL606/3901931‑3901966
                                                                      
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGG                                    <  1:5879808/36‑1 (MQ=1)
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGG                                    <  1:4794483/36‑1 (MQ=1)
GTGTTTAACTGTCCAAATTTTTGGGGTCAGTACAGG                                    >  1:799298/1‑36 (MQ=0)
 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGT                                   >  1:1301283/1‑36 (MQ=1)
 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGGT                                   <  1:4719054/36‑1 (MQ=1)
      AACTGTCCAACTTTTTGGGGTCAGTACAGGTTGCCC                              <  1:5749452/36‑1 (MQ=38)
       ACTGTCCAACTTTTTGGGGTCAGTACAGGTTGCCCA                             <  1:2740182/36‑1 (MQ=38)
       ACTATCCAACTTTTTGGGGTCAGTACAGGTTGCCCA                             <  1:1225791/36‑1 (MQ=255)
          GTCCAACTTTTTGGGGTCAGTACAGGTTGCCCACGT                          >  1:1018221/1‑36 (MQ=255)
           TCCAACTTTTTGGGGTCAGTACAGGTTGCCCAGGTG                         <  1:3653140/36‑1 (MQ=38)
             CAACTTTTTGGGGTCAGTACAGGTTGCCCAGGTGAC                       <  1:291042/36‑1 (MQ=38)
              AACTTTTTGGGGTCAGTACAGGTTGCCCAGGTGACC                      >  1:4248546/1‑36 (MQ=38)
               ACTTTTTGGGGTCAGTACAGGTTGCCCAGGTGACCA                     <  1:3644452/36‑1 (MQ=38)
                  cTTTGGGGTCAGTACAGGTTGCCCAGGTGACCAGCA                  <  1:1341685/35‑1 (MQ=255)
                   TTTGGGGTCAGTACAGGTTGCCCAGGTGACCAGCAC                 <  1:217109/36‑1 (MQ=255)
                   TTTGGGGTCAGTACAGGTTGCCCAGGTGACCAGCAC                 <  1:5647713/36‑1 (MQ=255)
                   TTTGGGGTCAGTACAGGTTGCCCAGGTGACCAGCAC                 <  1:5813060/36‑1 (MQ=255)
                      GGGGTCAGTACAGGTTGCCCAGGTGACCAGCACGCC              <  1:3281647/36‑1 (MQ=255)
                      GGGGTCAGTACAGGTTGCCCAGGTGACCAGCACGCC              <  1:132874/36‑1 (MQ=255)
                          TCAGTACAGGTTGCCCAGGTGACCAGCACGCCGCCA          <  1:4898020/36‑1 (MQ=255)
                           CAGTACAGGTTGCCCAGGTGACCAGCACGCCGCCAA         <  1:3281474/36‑1 (MQ=255)
                            AGTACAGGTTGCCCAGGCGACCAGCACGCCGCCAAG        >  1:4823841/1‑36 (MQ=255)
                             GTACAGGTTGCCCAGGTGACCAGCACGCCGCCAAGA       <  1:5573964/36‑1 (MQ=255)
                               ACAGGTTGCCCAGGTGACCAGCACGCCGCCAAGCAC     <  1:3020632/36‑1 (MQ=255)
                                                                      
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAG...................................  >  REL606/3894963‑3894996
................................CAGGTTGCCCAGGTGACCAGCACGCCGCCAAGAACGGG  >  REL606/3901931‑3901966

Base quality scores:  ATCG  < 3 ≤  ATCG  < 13 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 37 ≤  ATCG