New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1 =0 (0.000)44 (0.710) 33/70 NT 100% intergenic (–/‑189) –/thrL –/thr operon leader peptide
?REL606 = 4629812 0 (0.000)intergenic (+24/–) lasT/– predicted rRNA methyltransferase/–

GACATATTGCCCGTTGCAGTCAGAATGAAAAGCT...................................  <  REL606/34‑1
..................................GAAAAATACTTACTAAGGCGTTTTTTATTTGGTGA  <  REL606/4629812‑4629778
                                                                     
GACATATTGCCCGTTGCAGTCAGAATGAAAAGCTGA                                   <  1:1283959/36‑1 (MQ=1)
GACATATTGCCCGTTGCAGTCAGAATGAAAAGCTGA                                   <  1:5117733/36‑1 (MQ=1)
GACATATTGCCCGTTGCAGTCAGAATGAAAAGCTGA                                   <  1:6772537/36‑1 (MQ=1)
 ACATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAA                                  >  1:5279617/1‑36 (MQ=1)
  CATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAAA                                 <  1:382309/36‑1 (MQ=1)
   ATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAAAA                                <  1:5907319/36‑1 (MQ=1)
    TATTGCCCGTTGCAGTCAGAATGAAAAGCTGAAAAA                               >  1:4447778/1‑36 (MQ=1)
       TGCCCGTTTCAGTCAGAATGAAAAGCTGAAAAATAC                            <  1:1866488/36‑1 (MQ=0)
       TGCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATAC                            >  1:2068763/1‑36 (MQ=1)
       TGCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATAC                            >  1:2233410/1‑36 (MQ=1)
       TGCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATAC                            <  1:6397912/36‑1 (MQ=1)
        GCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATACT                           >  1:5557235/1‑36 (MQ=32)
        GCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATACT                           <  1:5263118/36‑1 (MQ=32)
         CCCGTTGCAGTCAGAATGAAAAGCTGAAAAATACTT                          >  1:625341/1‑36 (MQ=35)
         CCCGTTGCAGTCAGAATGAAAAGCTGAAAAATACTT                          <  1:1664165/36‑1 (MQ=35)
          CCGTTGCAGTCAGAATGAAAAGCTGAAAAATACTTA                         >  1:389412/1‑36 (MQ=35)
           CGTTGCAGTCAGAATGAAAAGCTGAAAAATACTTAC                        <  1:7001539/36‑1 (MQ=32)
           CGTTGCAGTCAGAATGAAAAGCTGAAAAATACTTAC                        >  1:8023270/1‑36 (MQ=32)
            GTTGCAGTCAGAATGAAAAGCTGAAAAATACTTACT                       >  1:3218379/1‑36 (MQ=1)
             TTGCAGTCAGAATGAAAAGCTGAAAAATACTTACTA                      <  1:6774341/36‑1 (MQ=1)
             TTGCAGTCAGAATGAAAAGCTGAAAAATACTTACTA                      <  1:5571271/36‑1 (MQ=1)
             TTGCAGTCAGAATGAAAAGCTGAAAAATACTTACTA                      <  1:819166/36‑1 (MQ=1)
              TGCGGTCAGAATGAAAAGCTGAAAAATACTTACTAA                     >  1:7445692/1‑36 (MQ=0)
               GCAGTCAGAATGAAAAGCTGAAAAATACTTACTAAG                    >  1:7503240/1‑36 (MQ=1)
                CAGTCAGAATGAAAAGCTGAAAAATACTTACTAAGG                   <  1:3687900/36‑1 (MQ=1)
                 AGTCAGAATGAAAAGCTGAAAAATACTTACTAAGGC                  >  1:346212/1‑36 (MQ=1)
                 AGTCAGAATGAAAAGCTGAAAAATACTTACTAAGGC                  >  1:668905/1‑36 (MQ=1)
                   TCAGAATGAAAAGCTGAAAAATACTCACTAAGGCGT                >  1:7712406/1‑36 (MQ=0)
                    CAGAATGAAAAGCTGAAAAATACTTACTAAGGCGTT               <  1:2534177/36‑1 (MQ=1)
                     AGAATGAAAAGCTGAAAAATACTTACTAAGGCGTTT              >  1:3212460/1‑36 (MQ=1)
                       AATGAAAAGCTGAAAAATACTTACTAAGGCGTTTTT            <  1:7998011/36‑1 (MQ=1)
                        ATGAAAAGCTGAAAAATACTTACTAAGGCGTTTTTT           <  1:2687846/36‑1 (MQ=1)
                        ATGAAAAGCTGAAAAATACTTACTAAGGCGTTTTTT           >  1:6892776/1‑36 (MQ=1)
                         TGAAAAGCTGAAAAATACTTACTAAGGCGTTTTTTA          >  1:8115786/1‑36 (MQ=1)
                         TGAAAAGCTGAAAAATACTTACTAAGGCGTTTTTTA          >  1:5825025/1‑36 (MQ=1)
                         TGAAAAGCTGAAAAATACTTACTAAGGCGTTTTTTA          >  1:7443174/1‑36 (MQ=1)
                          GAAAAGCTGAAAAATACTTACTAAGGCGTTTTTTAT         <  1:8073885/36‑1 (MQ=1)
                          GAAAAGCTGAAAAATACTTACTAAGGCGTTTTTTAT         <  1:5033284/36‑1 (MQ=1)
                           AAAAGCTGAAAAATACTTACTAAGGCGTTTTTTATT        >  1:257627/1‑36 (MQ=1)
                              AGCTGAAAAATACTTACTAAGGCGTTTTTTATTTGG     >  1:24803/1‑36 (MQ=1)
                               GCTGAAAAATACTTACTAAGGCGTTTTTTATTTGGT    >  1:6657074/1‑36 (MQ=1)
                                CTGAAAAATACTTACTAAGGCGTTTTTTATTTGGTG   <  1:6443186/36‑1 (MQ=1)
                                 TGAAAAATACTTACTAAGGCGTTTTTTATTTGGTGA  >  1:5894812/1‑36 (MQ=1)
                                 TGAAAAATACTTACTAAGGCGTTTTTTATTTGGTGA  >  1:136110/1‑36 (MQ=1)
                                                                     
GACATATTGCCCGTTGCAGTCAGAATGAAAAGCT...................................  <  REL606/34‑1
..................................GAAAAATACTTACTAAGGCGTTTTTTATTTGGTGA  <  REL606/4629812‑4629778

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 26 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG