Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC REL606 3,289,962 Δ16 bp 100% coding (96‑111/4554 nt) gltB → glutamate synthase, large subunit

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 3289962 3289977 16 28 [2] [0] 27 gltB glutamate synthase, large subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 32899612 (0.040)26 (0.580) 21/70 NT 96.3% coding (95/4554 nt) gltB glutamate synthase, large subunit
?REL606 3289978 = 0 (0.000)coding (112/4554 nt) gltB glutamate synthase, large subunit

GGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATAT...................................  >  REL606/3289927‑3289961
...................................CTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGC  >  REL606/3289978‑3290012
                                                                      
GGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATC                                    <  1:114273/36‑1 (MQ=255)
   TTCCCGCAGAGCCTGGGGGAGGTTCACGATATCTTG                                 >  1:2549687/1‑36 (MQ=255)
    TCCCGCAGAGCCTGGGGGAGGTTCACGATATCTTGA                                <  1:3141426/36‑1 (MQ=255)
      CCGCAGAGCCTGGGGGAGGTTCACGATATCTTGAGA                              >  1:212150/1‑36 (MQ=255)
      CCGCAGAGCCTGGGGGAGGTTCACGATATCTTGAGA                              >  1:3537964/1‑36 (MQ=255)
        GCAGAGCCTGGGGGAGGTTCACGATATCTTGAGAGG                            <  1:3666502/36‑1 (MQ=255)
         CAGAGCCTGGGGGAGGTTCACGATATCTTGAGAGGG                           >  1:479698/1‑36 (MQ=255)
           GAGGCTGGGGGAGGTTCACGATATCTTGAGAGGGAT                         <  1:2718163/36‑1 (MQ=255)
            AGCCTGGGGGAGGTTCACTATATCTTGAGAGGGATA                        <  1:2284033/36‑1 (MQ=255)
            AGCCTGGGGGAGGTTCACGATATCTTGAGAGGGATA                        >  1:1091927/1‑36 (MQ=255)
            AGCCTGGGGGAGGTTCACGATATCTTGAGAGGGATA                        >  1:2769377/1‑36 (MQ=255)
             GCCTGGGGGAGGTTCACGATATCTTGAGAGGGATAA                       >  1:725672/1‑36 (MQ=255)
               CTGGGGGAGGTTCACGATATCTTGAGAGGGATAACT                     <  1:734381/36‑1 (MQ=255)
               CTGGGGGAGGTTCACGATATCTTGAGAGGGATAACT                     >  1:1537984/1‑36 (MQ=255)
                 GGGGGAGGTTCACGATATCTTGAGAGGGATAACTGT                   <  1:2331652/36‑1 (MQ=255)
                 GGGGGAGGTTCACGATATCTTGAGAGGGATAACTGT                   <  1:4453292/36‑1 (MQ=255)
                 GGGGGAGGTTCACGATATCTTGAGAGGGATAACTGT                   <  1:675965/36‑1 (MQ=255)
                  GGGGAGGTTCACGATATCTTGAGAGGGATAACTGTG                  >  1:4836491/1‑36 (MQ=255)
                        GTTCACGATATCTTGAGAGGGATAACTGTGGTTTCG            >  1:2439790/1‑36 (MQ=255)
                         TTCACGATATCTTGAGAGGGATAACTGTGGTTTCGG           >  1:2284574/1‑36 (MQ=255)
                             CGATATCTTGAGAGGGATAACTGTGGTTTCGGCCTG       <  1:3836818/36‑1 (MQ=255)
                              GATATCTTGAGAGGGATAACTGTGGTTTCGGCCTGA      >  1:2561014/1‑36 (MQ=255)
                                TATCTTGAGAGGGATAACTGTGGTTTCGGCCTGATC    >  1:4012450/1‑36 (MQ=255)
                                 ATCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCG   >  1:2794408/1‑36 (MQ=255)
                                 ATCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCG   >  1:2071972/1‑36 (MQ=255)
                                  TCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGC  >  1:3576220/1‑36 (MQ=255)
                                                                      
GGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATAT...................................  >  REL606/3289927‑3289961
...................................CTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGC  >  REL606/3289978‑3290012

Base quality scores:  ATCG  < 3 ≤  ATCG  < 16 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG