New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 208645149 (0.950)6 (0.120) 4/60 NT 10.8% intergenic (‑872/‑673) yegL/yegM hypothetical protein/multidrug efflux system, subunit A
?REL606 2752961 = 50 (0.830)coding (1009/2562 nt) mutS DNA mismatch repair protein

ATACTTTCAGGAGTGAGGGTTGAGCGGGGTTTCCCCCGCC..................................  >  REL606/2086412‑2086451
...................................CCGCCGGGCTACAGCCGGTACTGCGTCAGGTCGGCGACC  >  REL606/2752961‑2752994
                                                                          
                         caGGTTTCCCCCGCCGGGCTACAGCCGGTACTGCGT               <  1:4121813/34‑1 (MQ=1)
                          GGGTTTCCCCCGCCGGGCTACAGCCGGTACTGCGTC              <  1:5730296/36‑1 (MQ=1)
                           GGTTTCCCCCGCCGGGCTACAGCCGGTACTGCGTCA             <  1:7071798/36‑1 (MQ=1)
                              TTCCCCCGCCGGGCTCCAGCCGGTACTGCGTCAGGT          <  1:6039310/36‑1 (MQ=0)
                                  CCCGCCGGGCTCCAGCCGGTACTGCGTCAGGTCGGC      <  1:623969/36‑1 (MQ=0)
                                  CCCGCCGGGCAACAGCCGGTACTGCGTCAGGTCGGC      <  1:1774682/36‑1 (MQ=0)
                                                                          
ATACTTTCAGGAGTGAGGGTTGAGCGGGGTTTCCCCCGCC..................................  >  REL606/2086412‑2086451
...................................CCGCCGGGCTACAGCCGGTACTGCGTCAGGTCGGCGACC  >  REL606/2752961‑2752994

Base quality scores:  ATCG  < 3 ≤  ATCG  < 4 ≤  ATCG  < 6 ≤  ATCG  < 24 ≤  ATCG  < 37 ≤  ATCG