New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 221948 =52 (0.870)4 (0.070) 4/68 NT 7.9% coding (487/708 nt) yaeB hypothetical protein
?REL606 4351442 = 41 (0.660)intergenic (+50/‑88) groEL/yjeI chaperonin GroEL/hypothetical protein

GCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGAT  >  REL606/4351407‑4351477
                                   |                                   
aaaGAAATAAACAAACCCCCGGGCAGAAATGTCTgg                                     <  1:2578546/34‑1 (MQ=255)
 tatgcgcaaagtgcgccagcggcagaaatggcgggg                                    >  1:2164977‑M2/35‑36 (MQ=255)
 cAGAAATAAACAAACCCCCGGGCAGAAATGTCTggg                                    <  1:1484922/36‑1 (MQ=255)
  atgcgcaaagtgcgccagcggcagaaatggcggggg                                   >  1:7066026‑M2/34‑36 (MQ=255)
  aGAAATAAACAACCCCCCGGGCAGAAATGTCTgggg                                   <  1:4902573/36‑1 (MQ=255)
  aGAAATAAACAAACCCCCGGGCAGAAATGTCTgggg                                   >  1:4771901/1‑36 (MQ=255)
   gAAATAAACAAACCCCCGGGCAGAAATGTCTggggg                                  >  1:5540957/1‑36 (MQ=255)
   gAAATAAACAAACCCCCGGGCAGAAATGTCTggggg                                  <  1:6529989/36‑1 (MQ=255)
    aaaTAAACAAACCCCCGGGCAGAAATGTCTGGGGGt                                 >  1:6302631/1‑36 (MQ=255)
     aaTAAACAAACCCCCGGGCAGAAATGTCTGGGGGtt                                >  1:7577044/1‑36 (MQ=255)
      aTAAACAAACCCCCGGGCAGAAATGTCTGGGGGttt                               <  1:3371360/36‑1 (MQ=255)
       tAAACAAACCCCCGGGAAGTAATGTCTGGGGGgttt                              >  1:481283/1‑36 (MQ=37)
       caaagtgcgccagcggcagaaatggcggGGGGgttt                              >  1:3424841‑M2/29‑36 (MQ=255)
        aaacaaacCCCCGGGCAGAAATGTCTGGGGGttttt                             >  1:6461075/1‑36 (MQ=255)
        aaacaaacCCCCGGGCAGAAATGTCTGGGGGttttt                             <  1:5092581/36‑1 (MQ=255)
        aaacaaacCCCCGGGCAGAAATGTCTGGGGGttttt                             >  1:507882/1‑36 (MQ=255)
         aagtgcgccagcggcagaaatggcggGGGGGTTTTc                            >  1:7992905‑M2/27‑36 (MQ=255)
         aacaaacCCCCGGGCAGAAATGTCTGGGGGTTTTTc                            <  1:4774260/36‑1 (MQ=255)
         aacaaacCCCCGGGCAGAAATGTCTGGGGGTTTTTc                            >  1:6903878/1‑36 (MQ=255)
          acaaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCt                           >  1:3383165/1‑36 (MQ=255)
            aaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCttt                         >  1:1071290/1‑36 (MQ=255)
            aaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCttt                         >  1:1930358/1‑36 (MQ=255)
            aaacCCCCGGGCAGAAATGTCTGGGGGTTTTTCttt                         >  1:252699/1‑36 (MQ=255)
            aaacCCCCGGGCAGAAATGTCTGCGGGATTTTCttt                         >  1:6982200/1‑36 (MQ=37)
             aacCCCCGGGCAGAAATGTCTGGGGGTTTTTCtttt                        <  1:6046580/36‑1 (MQ=255)
               cccccGGGCAGAAATGTCTGGGGGTTTTTCTTTTgg                      <  1:6104269/36‑1 (MQ=255)
                 cccGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTc                    <  1:1700446/36‑1 (MQ=255)
                 cccGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTc                    >  1:7539248/1‑36 (MQ=255)
                 cccGGGAAGAAATGGCTGGGGGTTTTTCGTTTGGTc                    >  1:4734906/1‑36 (MQ=25)
                   cGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt                  <  1:2182096/36‑1 (MQ=255)
                   cGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCAt                  <  1:4747705/36‑1 (MQ=255)
                    gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATc                 <  1:3476180/36‑1 (MQ=255)
                    gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATc                 >  1:3410190/1‑36 (MQ=255)
                    gggCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATc                 <  1:5722398/36‑1 (MQ=255)
                      gCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCtt               <  1:7243500/36‑1 (MQ=255)
                        aGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTc             >  1:6730083/1‑36 (MQ=255)
                        aGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTc             >  1:1791445/1‑36 (MQ=255)
                           aaTGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAg          >  1:6737121/1‑36 (MQ=255)
                            aTGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGt         >  1:7660523/1‑36 (MQ=255)
                              gTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGtat       >  1:2978640/1‑36 (MQ=255)
                              gTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGtat       >  1:7422391/1‑36 (MQ=255)
                              gTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGtat       <  1:4682828/36‑1 (MQ=255)
                               tCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGtata      >  1:6519974/1‑36 (MQ=255)
                                cTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATaa     <  1:1800623/36‑1 (MQ=255)
                                 tGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAg    >  1:534940/1‑36 (MQ=255)
                                 tGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAg    >  1:7785056/1‑36 (MQ=255)
                                   ggggTTTTTCTTTTGGTCATCTTTCTAGTATAAGAt  <  1:5627392/36‑1 (MQ=255)
                                   ggggTTTTTCTTTTGGTCATCTTTCTAGTATAAGAt  >  1:429735/1‑36 (MQ=255)
                                   |                                   
GCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGAT  >  REL606/4351407‑4351477

Base quality scores:  ATCG  < 3 ≤  ATCG  < 13 ≤  ATCG  < 25 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG