New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 640118 =35 (0.650)11 (0.200) 6/62 NT 21.8% intergenic (+36/+19) cspE/ccrB cold shock protein E/camphor resistance protein CrcB
?REL606 3995534 = 44 (0.720)coding (54/768 nt) ECB_03724 putative transcriptional regulator

GATACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGTTTTTTTTTGGTCTTTAGTGTGCGGTTGAGG  >  REL606/640083‑640153
                                   |                                   
ccaccgcaggcgcacaaacgttattacgtggactgg                                     <  1:7382550‑M1/1‑1 (MQ=255)
 caccgcaggcgcacaaacgttattacgtggactgGc                                    <  1:5781756‑M1/2‑1 (MQ=255)
 caccgcaggcgcacaaacgttattacgtggactgGc                                    <  1:6283706‑M1/2‑1 (MQ=255)
  accgcaggcgcacaaacgttattacgtggactgGCg                                   >  1:3803242‑M1/34‑36 (MQ=255)
  accgcaggcgcacaaacgttattacgtggactgGCg                                   <  1:1984410‑M1/3‑1 (MQ=255)
   ccgcaggcgcacaaacgttattacgtggactgGCgg                                  <  1:1175611‑M1/4‑1 (MQ=255)
   ccgcaggcgcacaaacgttattacgtggactgGCgg                                  <  1:2748857‑M1/4‑1 (MQ=255)
   ccgcaggcgcacaaacgttattacgtggactgGCgg                                  <  1:2195574‑M1/4‑1 (MQ=255)
   aCGTCAGCAAGAATTCAAAACCCGCTTAATCAGCgg                                  >  1:2388280/1‑36 (MQ=255)
    cgcaggcgcacaaacgttattacgtggactgGCggg                                 <  1:285378‑M1/5‑1 (MQ=255)
    cGTCAGCAAGAATTCAAAACCCGCTTAATCAGCggg                                 <  1:336335/36‑1 (MQ=255)
     gTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGt                                >  1:7508937/1‑36 (MQ=255)
      caggcgcacaaacgttattacgtggactgGCGGgtg                               <  1:2838330‑M1/7‑2 (MQ=255)
       cAGCAAGAATTCAAAACCCGCTTAATCAGCGGGttt                              <  1:4824248/36‑1 (MQ=255)
       aggcgcacaaacgttattacgtggactgGCGggtgt                              <  1:3414562‑M1/8‑3 (MQ=255)
       aggcgcacaaacgttattacgtggactgGCGGGttt                              <  1:1200583‑M1/8‑1 (MQ=255)
        ggcgcacaaacgttattacgtggactgGCgggtgtt                             <  1:1537197‑M1/9‑4 (MQ=255)
        aGCAAGAATTCAAAACCCGCTTAATCAGCGGGtttt                             >  1:4657990/1‑36 (MQ=255)
         gcgcacaaacgttattacgtggactgGCGGGgtttt                            <  1:1237183‑M1/10‑1 (MQ=255)
         gCAAGAATTCAAAACCCGCTTAATCAGCGGGttttt                            >  1:7887720/1‑36 (MQ=255)
          cAAGAATTCAAAACCCGCTTAATCAGCGGGtttttt                           <  1:4907699/36‑1 (MQ=255)
           gcacaaacgttattacgtggactgGCGGGttttttt                          <  1:612949‑M1/12‑1 (MQ=255)
           aaGAATTCAAAACCCGCTTAATCAGCGGGttttttt                          <  1:2853646/36‑1 (MQ=255)
           aaGAATTCAAAACCCGCTTAATCAGCGGGttttttt                          >  1:6390557/1‑36 (MQ=255)
           aaGAATTCAAAACCCGCTTAATCAGCGGGttttttt                          <  1:1119461/36‑1 (MQ=255)
           aaGAATTCAAAACCCGCTTAATATGCGGGttttttt                          >  1:7107311/1‑36 (MQ=37)
            cacaaacgttattacgtggactgGCGGGtttttttt                         <  1:4229276‑M1/13‑1 (MQ=255)
            aGAATTCAAAACCCGCTTAATCAGCGGGtttttttt                         <  1:7859818/36‑1 (MQ=255)
            aGAATTCAAAACCCGCTTAATCAGCGGGtttttttt                         <  1:6303232/36‑1 (MQ=255)
            aGAATTCAAAACCCGCTTAATCAGCGGGtttttttt                         <  1:4568258/36‑1 (MQ=255)
            aGAATTCAAAACCCGCTTAATCAGCGGGtttttttt                         <  1:3418859/36‑1 (MQ=255)
             gAATTCAAAACCCGCTTAATCAGCGGGttttttttt                        <  1:965955/36‑1 (MQ=255)
             acaaacgttattacgtggactgGCGGGttttttttt                        <  1:5831799‑M1/14‑1 (MQ=255)
                ttCAAAACCCGCTTAATCAGCGGGTTTTTTTTTGGt                     >  1:6271098/1‑36 (MQ=255)
                aacgttattacgtggactgGCgggtttttttttttt                     <  1:3661206‑M1/17‑4 (MQ=255)
                aacgttattacgtggactgGCgggtttttttttttt                     <  1:4497727‑M1/17‑4 (MQ=255)
                 tgaaaaCCCGCTTAATCAGCGGGTTTTTTTTTGGTc                    <  1:3934443/34‑1 (MQ=255)
                 tCAAAACCCGCTTAATCAGCGGGTTTTTTTTTGGTc                    <  1:6489457/36‑1 (MQ=255)
                 tCAAAACCCGCTTAATCAGCGGGTTTTTTTTTGGTc                    <  1:2237981/36‑1 (MQ=255)
                   aaaaCCCGCTTAATCAGCGGGTTTTTTTTTGGTCtt                  <  1:2612893/36‑1 (MQ=255)
                   aaaaCCCGCTTAATCAGCGGGTTTTTTTTTGGTCtt                  >  1:2135278/1‑36 (MQ=255)
                    aaaCCCGCTTAATCAGCGGGTTTTTTTTTGGTCttt                 <  1:1274647/36‑1 (MQ=255)
                     aaCCCGCTTAATCAGCGGGTTTTTTTTTGGTCTTTa                <  1:1547395/36‑1 (MQ=255)
                      aCCCGCTTAATCAGCGGGTTTTTTTTTGGTCTTTAg               <  1:1253879/36‑1 (MQ=255)
                       cccGCTTAATCAGCGGGTTTTTTTTTGGTCTTTAgt              <  1:7784005/36‑1 (MQ=255)
                       cccGCTTAATCAGCGGGTTTTTTTTTGGTCTTTAgt              <  1:2454599/36‑1 (MQ=255)
                       cccGCTTAATCAGCGGGTTTTTTTTTGGTCTTTAgt              <  1:5978693/36‑1 (MQ=255)
                        ccGCTTAATCAGCGGGTTTTTTTTTGGTCTTTAgtt             >  1:4463048/1‑35 (MQ=255)
                         cGCTTAATCAGCGGGTTTTTTTTTGGTCTTTAgtgt            <  1:887831/36‑1 (MQ=255)
                          tcTTAATCAGCGGGTTTTTTTTTGGTCTTTAGtgtg           <  1:7840060/35‑1 (MQ=255)
                          gCTTAATCAGCGGGTTTTTTTTTGGTCTTTAGtgtg           >  1:2094971/1‑36 (MQ=255)
                           cTTAATCAGCGGGTTTTTTTTTGTTGTTTAGTTTGc          >  1:361112/1‑36 (MQ=25)
                           cTTAATCAGCGGGTTTTTTTTTGGTCTTTAGTGTGc          <  1:6887422/36‑1 (MQ=255)
                             tAATCAGCGGGTTTTTTTTTGGTCTTTAGTGTGCgg        <  1:1973199/36‑1 (MQ=255)
                                 cAGCGGGTTTTTTTTTGGTCTTTAGTGTGCGGTTGa    <  1:5955570/36‑1 (MQ=255)
                                   GCGGGTTTTTTTTTGGTCTTTTGTGTGCGGTTGAgg  <  1:5337513‑M1/36‑1 (MQ=255)
                                   |                                   
GATACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGTTTTTTTTTGGTCTTTAGTGTGCGGTTGAGG  >  REL606/640083‑640153

Base quality scores:  ATCG  < 3 ≤  ATCG  < 13 ≤  ATCG  < 25 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG