New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 3893549 =NA (NA)3 (0.060) 3/60 NT NA intergenic (+4/‑52) kup/insJ‑5 potassium transporter/IS150 hypothetical protein
?REL606 = 3894994 NA (NA)noncoding (1441/1443 nt) IS150 repeat region

CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGACGCCTCCTTTCTTCATAAGGGGGCGTTTTTG  >  REL606/3894960‑3895029
                                  |                                   
cTCGTGTTTAACTGTCCAACTTTTTGTGGTCAGTAC                                    >  1:4726210‑M1/1‑36 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGTTCAGTAC                                    <  1:1613160‑M1/36‑1 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    <  1:766538‑M1/36‑1 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    >  1:6092180‑M1/1‑36 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    <  1:4653355‑M1/36‑1 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    <  1:3622169‑M1/36‑1 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    >  1:5064154‑M1/1‑36 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    >  1:6286531‑M1/1‑36 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    <  1:6057648‑M1/36‑1 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    >  1:2595992‑M1/1‑36 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    >  1:241358‑M1/1‑36 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    <  1:2199613‑M1/36‑1 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    <  1:4135348‑M1/36‑1 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    >  1:2147310‑M1/1‑36 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    <  1:4223455‑M1/36‑1 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    <  1:5882282‑M1/36‑1 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    >  1:7136578‑M1/1‑36 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    >  1:5076211‑M1/1‑36 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    <  1:8398452‑M1/36‑1 (MQ=255)
cTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTAC                                    <  1:4395085‑M1/36‑1 (MQ=255)
 tcctgtttaACTGTCCAACTTTTTGGGGTCAGTACA                                   <  1:8040068‑M1/33‑1 (MQ=255)
 tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                   >  1:6457403‑M1/1‑36 (MQ=255)
 tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                   <  1:4346649‑M1/36‑1 (MQ=255)
 tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                   >  1:7147200‑M1/1‑36 (MQ=255)
 tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                   <  1:7204954‑M1/36‑1 (MQ=255)
 tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                   >  1:7528990‑M1/1‑36 (MQ=255)
 tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                   >  1:566189‑M1/1‑36 (MQ=255)
 tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                   <  1:5744662‑M1/36‑1 (MQ=255)
 tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                   >  1:7700932‑M1/1‑36 (MQ=255)
 tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                   <  1:1361134‑M1/36‑1 (MQ=255)
 tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                   <  1:1452495‑M1/36‑1 (MQ=255)
 tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                   <  1:7964296‑M1/36‑1 (MQ=255)
 tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                   <  1:1631532‑M1/36‑1 (MQ=255)
 tCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                   >  1:1533219‑M1/1‑36 (MQ=255)
 tCGTGTGTAACTGTCCAACTTTTTGGGGTCAGTACA                                   <  1:5039475‑M1/36‑1 (MQ=255)
  cGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAg                                  <  1:3023244‑M1/36‑2 (MQ=255)
  cGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAg                                  <  1:7305990‑M1/36‑2 (MQ=255)
   gtgtTTAACTGTCCAACTTTTTGGGGTCAGTACAgg                                 <  1:1624707‑M1/36‑3 (MQ=255)
    tgtTTAACTGTCCACCTTTTTGGGGTCAGTAcagac                                >  1:5633225‑M2/1‑31 (MQ=255)
    tgtTTAACTGTCCAACTTTTTGTGGTCCGTACAGAc                                <  1:26093/36‑1 (MQ=14)
    tgtTTAACTGTCCAACTTTTTGGGGTCAGTAcagac                                >  1:268887‑M2/1‑31 (MQ=255)
    tgtTTAACTGTCCAACTTTTTGGGGTCAGTACAggt                                >  1:7136559‑M1/1‑33 (MQ=255)
    tgtTTAACTGTCCAACTTTTTGGGGTCAGTACAggt                                >  1:4710063‑M1/1‑33 (MQ=255)
    tgtTTAACTGTCCAACTTTTTGGGGTCAGTACAggt                                <  1:4833706‑M1/36‑4 (MQ=255)
    tgtTTAACTGTCCAACTTTTTGGGGTCAGTACAggt                                <  1:3538333‑M1/36‑4 (MQ=255)
    tgtTTAACTGTCCAACTTTTTGGGGTCAGTACAggt                                >  1:7705569‑M1/1‑33 (MQ=255)
     gtTTAACTGTCCAACTTTTTGGGGTCAGTAcagact                               <  1:5109585‑M2/36‑7 (MQ=255)
     gtTTAACTGTCCAACTTTTTGGGGTCAGTACAtgtt                               >  1:3311491‑M1/1‑32 (MQ=255)
     gtTTAACTGTCCAACTTTTTGGGGTCAGTACAggtt                               >  1:4482414‑M1/1‑32 (MQ=255)
     gtTTAACTGTCCAACTTTTTGGGGTCAGTACAggtt                               <  1:2609794‑M1/36‑5 (MQ=255)
     gtTTAACTGTCCAACTTTTTGGGGTCAGTACAggta                               >  1:4167577‑M1/1‑32 (MQ=255)
     gtTTAACTGTCCAACGTTTTGGGGTCAGTACAggtt                               <  1:4319256‑M1/36‑5 (MQ=255)
      tttAACTGTCCAACTTTTTGGGGTTAGTACAggttg                              >  1:8226643‑M1/1‑31 (MQ=255)
      tttAACTGTCCAACTTTTTGGGGTCAGTACAtgttg                              >  1:5908830‑M1/1‑31 (MQ=255)
      tttAACTGTCCAACTTTTTGGGGTCAGTACAgggag                              <  1:5584253‑M1/36‑6 (MQ=255)
       ttAACTGTCCAACTTTTTGGGGTCAGTACAtgttga                             <  1:5231184‑M1/36‑7 (MQ=255)
       ttAACTGTCCAACTTTTTGGGGTCAGTACAtgttga                             <  1:1624369‑M1/36‑7 (MQ=255)
       ttAACTGTCCAACTTTTTGGGGTCAGTACAggttgc                             >  1:5407903‑M1/1‑30 (MQ=255)
       ttAACTGTCCAACTTTTTGGGGTCAGTACAggttgc                             >  1:2825879‑M1/1‑30 (MQ=255)
       ttAACTGTCCAACTTTTTGGGGTCAGTACAggttgc                             <  1:7670961‑M1/36‑7 (MQ=255)
       ttAACTGTCCAACTTTTTGGGGTCAGTACAgggtgc                             <  1:7786761‑M1/36‑7 (MQ=255)
        tAACTGTCCAACTTTTTGGGGTCAGTACAggttgcc                            >  1:3778376‑M1/1‑29 (MQ=255)
        tAACTGTCCAACTTTTTGGGGTCAGTACAggttgcc                            <  1:2825816‑M1/36‑8 (MQ=255)
         aaCTGTCCAACTTTTTGGGGTCAGTACAggttgccc                           >  1:6553673‑M1/1‑28 (MQ=255)
         aaCTGTCCAACTTTTTGGGGTCAGTACAggttgccc                           <  1:6680120‑M1/36‑9 (MQ=255)
          aCTGTCCAACTTTTTGGGGTCAGTACAggttgccca                          <  1:76155‑M1/36‑10 (MQ=255)
          aCTGTCCAACTTTTTGGGGTCAGTACAggttgccca                          >  1:5874836‑M1/1‑27 (MQ=255)
           cTGTCCAACTTTTTGGGGTCAGTACAggttgcccag                         >  1:967041‑M1/1‑26 (MQ=255)
            tGTCCAACTTTTTGGGGTCAGTACAggttgcccagg                        <  1:8477120‑M1/36‑12 (MQ=255)
            tGTCCAACTTTTTGGGGTCAGTACAggttgcccagg                        <  1:3430011‑M1/36‑12 (MQ=255)
             gTCCAACTTTTTGGGGTCAGTACAggttgcccaggt                       <  1:5094003‑M1/36‑13 (MQ=255)
             gTCCAACTTTTTGGGGTCAGTACAggttgcccaggt                       <  1:4755067‑M1/36‑13 (MQ=255)
             gTCCAACTTTTTGGGGTCAGTACAggttgcccaggt                       <  1:7815033‑M1/36‑13 (MQ=255)
             gTCCAACTTTTTGGGGTCAGTACAggttgcccaggt                       <  1:2605940‑M1/36‑13 (MQ=255)
              tCCAACTTTTTGGGGTCAGTACAggttgcccaggtg                      <  1:1222132‑M1/36‑14 (MQ=255)
              tCCAACTTTTTGGGGTCAGTACAggttgcccaggtg                      >  1:3508877‑M1/1‑23 (MQ=255)
               ccAACTTTTTGGGGTCAGTACAggttgcccaggtga                     <  1:5912454‑M1/36‑15 (MQ=255)
                cAACTTTTTGGGGTCAGTAcagactgtactgcaccc                    >  1:7595546‑M2/1‑19 (MQ=255)
                cAACTTTTTGGGGTCAGTACAggttgcccaggtgac                    >  1:5767882‑M1/1‑21 (MQ=255)
                  aCTTTTTGGGGTCAGTACAggttgcccaggtgacca                  >  1:1083409‑M1/1‑19 (MQ=255)
                   cTTTTTGTGGTCAGTACAggttgcccaggtgaccag                 <  1:2153779‑M1/36‑19 (MQ=255)
                   cTTTTTGGGGTCAGTACAggttgcccaggtgaccag                 >  1:3430241‑M1/1‑18 (MQ=255)
                   cTTTTTGGGGTCAGTACAggttgcccaggtgaccag                 <  1:3431494‑M1/36‑19 (MQ=255)
                    tttttGGGGTCAGTACAggttgcccaggtgaccagc                <  1:5555194‑M1/36‑20 (MQ=255)
                    tttttGGGGTCAGTACAggttgcccaggtgaccagc                <  1:5212371‑M1/36‑20 (MQ=255)
                    tttttGGGGTCAGTACAggttgcccaggtgaccagc                <  1:4565127‑M1/36‑20 (MQ=255)
                     ttttGGGGTCAGTACAggttgcccaggtgaccagca               <  1:2804682‑M1/36‑21 (MQ=255)
                     ttttGGGGTCAGTACAggttgcccaggtgaccagca               >  1:2798417‑M1/1‑16 (MQ=255)
                     ttttGGGGTCAGTACAggttgcccaggtgaccagca               <  1:7798038‑M1/36‑21 (MQ=255)
                      tttGGGGTCAGTACAggttgcccaggtgaccagcac              <  1:1104239‑M1/36‑22 (MQ=255)
                        tGGGGTCAGTACAggttgcccaggtgaccagcacgc            <  1:5712223‑M1/36‑24 (MQ=255)
                         ggggTCAGTACAggttgcccaggtgaccagcacgcc           <  1:741927‑M1/36‑25 (MQ=255)
                          gggTCAGTAcagactgtactgcacccattttgttgg          <  1:2817926‑M2/36‑28 (MQ=255)
                          gggTCAGTACAggttgcccaggtgaccagcacgccg          <  1:7969831‑M1/36‑26 (MQ=255)
                           ggTCAGTACAggttgcccaggtgaccagctcgccgc         <  1:4317586‑M1/36‑27 (MQ=255)
                            gTCAGTACAggttgcccaggtgaccagcacgccgcc        <  1:3281441‑M1/36‑28 (MQ=255)
                              cAGTACAggttgcccaggtgaccagcacgccgccaa      >  1:7714081‑M1/1‑7 (MQ=255)
                               aGTACAggttgcccaggtgaccagcacgccgccaag     >  1:2868249‑M1/1‑6 (MQ=255)
                                  aCAggttgcccaggtgaccagcacgccgccaagaac  <  1:1787008‑M1/36‑34 (MQ=255)
                                  aCAggttgcccaggtgaccagcacgccgccaagaac  <  1:7358151‑M1/36‑34 (MQ=255)
                                  |                                   
CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGACGCCTCCTTTCTTCATAAGGGGGCGTTTTTG  >  REL606/3894960‑3895029

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 25 ≤  ATCG  < 31 ≤  ATCG  < 37 ≤  ATCG