New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 185468326 (0.560)5 (0.110) 3/54 NT 14.5% coding (79/255 nt) yoaF conserved outer membrane protein
?REL606 = 4266654 33 (0.550)intergenic (‑350/‑43) acs/nrfA acetyl‑coenzyme A synthetase/nitrite reductase, formate‑dependent, cytochrome

CGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAGGGGTTGAACAACCAG  >  REL606/1854648‑1854718
                                   |                                   
cGACGCCGGATTTGCCATACCAATCTGCGGCGGTTT                                     <  1:3153809‑M1/36‑1 (MQ=255)
 gACGCCGGATTTGCCATACCAATCTGCGGCGGTTTt                                    >  1:1384665‑M1/1‑35 (MQ=255)
  aCGCCGGATTTGCCATACCAATCTGCGGCGGTTTtt                                   >  1:6202243‑M1/1‑34 (MQ=255)
  aCGCCGGATTTGCCATACCAATCTGCGGCGGTTTtg                                   >  1:5053036‑M1/1‑34 (MQ=255)
  aCGCCGGATTTGCCATACCAATCTGCGGCGGGTTtg                                   >  1:4617256‑M1/1‑34 (MQ=255)
     ccGGATTTGCCATACCAATCTGCGGCGGTTTTgggg                                >  1:63398/1‑34 (MQ=38)
     ccGGATTTGCCATACCAATCTGCGGCGGTTTAGGTg                                <  1:208240/36‑1 (MQ=255)
      cGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGc                               <  1:4609949/36‑1 (MQ=255)
       ggATTTGCCATACCAATCTGCGGCGGTTTAGGTGCt                              <  1:5373415/36‑1 (MQ=255)
        gATTTGCCATACCAATCTGCGGCGGTTTAGGTGCtt                             <  1:2840246/36‑1 (MQ=255)
          tttGCCATACCAATCTGCGGCGGTTTtttttgtttt                           >  1:4908588‑M1/1‑26 (MQ=255)
          tttGCCATACCAATCTGCGGCGGTTTTTGTGCtttt                           >  1:7312360/1‑34 (MQ=37)
          tttGCCATACCAATCTGCGGCGGTTTAGGTGCTTCt                           <  1:7255151/36‑1 (MQ=255)
          tttGCCATACCAATCTGCGGCGGTTTAGGTGCTTCt                           <  1:462760/36‑1 (MQ=255)
           ttGCCATACCAATCTGCGGCGTTTTAGGTGCTTCTg                          <  1:7715963/36‑1 (MQ=255)
            tGCCATACCAATCTGCGGCGGTTTTGGTGGTTCttt                         >  1:1800385/1‑34 (MQ=25)
            tGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTgg                         <  1:2590776/36‑1 (MQ=255)
                aTACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTga                     <  1:3591624/36‑1 (MQ=255)
                 tACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTgag                    <  1:5274229/36‑1 (MQ=255)
                  aCCAATCTGCGGCGGTTTAGGTGCTTCTGGCTgaga                   <  1:500783/36‑1 (MQ=255)
                  aCCAATCTGCGGCGGTTTAGGTGCTTCTGGCTgaga                   <  1:4916092/36‑1 (MQ=255)
                      aTCTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAggg               <  1:1805516/36‑1 (MQ=255)
                        cTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAGGGGt             <  1:7030716/36‑1 (MQ=255)
                           cggcggTTTAGGTGCTTCTGGCTGAGAAGGGGTTGa          <  1:5757064/36‑1 (MQ=255)
                              cggTTTAGGTGCTTCTGGCTGAGAAGGGGTTGaaca       <  1:2524180/36‑1 (MQ=255)
                               ggTTTttattgtttttcacgacagtaaccgcaccta      >  1:5475810‑M1/1‑5 (MQ=255)
                               ggTTTttattgtttttcacgacagtaaccgcaccta      <  1:1786231‑M1/36‑32 (MQ=255)
                               ggTTTAGGTGCTTCTGGCTGAGAAGGGGTTGaacaa      <  1:2028370/36‑1 (MQ=255)
                                gTTTttattgtttttcacaacagtaaccgcacctac     >  1:6458527‑M1/1‑4 (MQ=255)
                                gTTTAGGTGCTTCTGGCTGAGAAGGGGTTGaacaac     <  1:4307376/36‑1 (MQ=255)
                                gTTTAGGTGCTTCTGGCTGAGAAGGGGTTGaacaac     <  1:5644237/36‑1 (MQ=255)
                                gTTTAGGTGCTTCTGGCTGAGAAGGGGTTGaacaac     >  1:4193380/1‑36 (MQ=255)
                                 tttttattgtttttcacgacagtaaccgcacctaca    <  1:2036716‑M1/36‑34 (MQ=255)
                                 tttttattgtttttcacgacagtaaccgcacctaca    <  1:2729121‑M1/36‑34 (MQ=255)
                                 tttttattgtttttcacgacagtaaccgcacctaca    >  1:3354270‑M1/1‑3 (MQ=255)
                                 tttAGGTGCTTCTGGCTGAGAAGGGGTTGAACAAcc    >  1:1782728/1‑36 (MQ=255)
                                 tttAGGTGCTTCTGGCTGAGAAGGGGTTGAACAAcc    <  1:4151647/36‑1 (MQ=255)
                                  ttttattgtttttcacgacagtaaccgcacctacac   <  1:7278335‑M1/36‑35 (MQ=255)
                                  ttttattgtttttcacgacagtaaccgcacctacac   >  1:2262089‑M1/1‑2 (MQ=255)
                                  ttAGGTGCTTCTGGCTGAGAAGGGGTTGaacaacaa   >  1:2938680/1‑34 (MQ=255)
                                   tttattgtttttcacgacagtaaccgcacctacact  >  1:1397330‑M1/1‑1 (MQ=255)
                                   tAGGTGCTTCTGGCTGAGAAGGGGTTGAACAAccag  <  1:5248405/36‑1 (MQ=255)
                                   tAGGTGCTTCTGGCTGAGAAGGGGTTGAACAAccag  <  1:4766306/36‑1 (MQ=255)
                                   |                                   
CGACGCCGGATTTGCCATACCAATCTGCGGCGGTTTAGGTGCTTCTGGCTGAGAAGGGGTTGAACAACCAG  >  REL606/1854648‑1854718

Base quality scores:  ATCG  < 3 ≤  ATCG  < 13 ≤  ATCG  < 24 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG