New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1241529 =22 (0.460)4 (0.080) 3/56 NT 16.0% coding (693/1737 nt) ycgO potassium/proton antiporter
?REL606 = 2574504 20 (0.330)intergenic (+346/+472) sseA/sseB 3‑mercaptopyruvate sulfurtransferase/rhodanase‑like enzyme, sulfur transfer from thiosulfate

CCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGC  >  REL606/1241494‑1241564
                                   |                                   
ccTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATa                                     <  1:5993472/36‑1 (MQ=255)
      aGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCa                               >  1:7826296/1‑36 (MQ=255)
        cgcAGTAGTTAATGAGAAAATCAGAATACCGCCACt                             >  1:1176791/1‑36 (MQ=255)
           agtagtTAATGAGAAAATCAGAATACCGCCACTTaa                          >  1:522037/1‑36 (MQ=255)
             tagtTAATGAGAAAATCAGAATACCGCCACTTAATg                        >  1:2189842/1‑36 (MQ=255)
               gtTAATGAGAAAATCAGAATACCGCCACTTAATGcc                      >  1:2158060/1‑36 (MQ=255)
               gtTAATGAGAAAATCAGAATACCGCCACTTAATGcc                      >  1:6634829/1‑36 (MQ=255)
                 tAATGAGAAAATCAGAATACCGCCACTTAATGCCAg                    >  1:2654557/1‑36 (MQ=255)
                 tAATGAGAAAATCAGAATACCGCCACTTAATGCCAg                    >  1:3667610/1‑36 (MQ=255)
                  aaTGAGAAAATCAGAATACCGCCACTTAATGCCAGc                   >  1:2698502/1‑36 (MQ=255)
                  aaTGAGAAAATCAGAATACCGCCACTTAATGCCAGc                   >  1:2066973/1‑36 (MQ=255)
                    tGAGAAAATCAGAATACCGCCACTTAATGCCAGCaa                 >  1:4408008/1‑36 (MQ=255)
                     gagaAAATCAGAATACCGCCACTTAATGCCAGCAAt                >  1:3228490/1‑36 (MQ=255)
                     gagaAAATCAGAATACCGCCACTTAATGCCAGCAAt                >  1:4973225/1‑36 (MQ=255)
                       aaaaaaaaaaaaACCGCCACTTAATGCCAGCAATgg              >  1:643491‑M1/13‑36 (MQ=255)
                         aaaaaaaaaaACCGCCACTTAATGCCAGCAATGGat            >  1:1434787‑M1/11‑36 (MQ=255)
                         aaaaaaaaaaACCGCCACTTAATGCCAGCAATGGat            >  1:3870186‑M1/11‑36 (MQ=255)
                         aaaTCAGAATACCGCCACTTAATGCCAGCAATGGat            >  1:675486/1‑36 (MQ=255)
                         aaaTCAAAAACCCGCCACTTAATGCCAGCAATGGat            <  1:7417111/36‑1 (MQ=25)
                           aTCAGAATACCGCCACTTAATGCCAGCAATGGatat          >  1:5052252/1‑36 (MQ=255)
                            tCAGAATACCGCCACTTAATGCCAGCAATGGAtata         >  1:4597214/1‑36 (MQ=255)
                              aGAATACCGCCACTTAATGCCAGCAATGGATATAAt       >  1:4795773/1‑36 (MQ=255)
                              aGAATACCGCCACTTAATGCCAGCAATGGATATAAt       >  1:3247751/1‑36 (MQ=255)
                              aGAATACCGCCACTTAATGCCAGCAACGGATATaag       >  1:3798583/1‑35 (MQ=255)
                               acaTACCGCCACTTAATGCCAGCAATGGATATAATc      <  1:5797895/34‑1 (MQ=255)
                               aaaaACCGCCACTTAATGCCAGCAATGGATATAATc      >  1:7910257‑M1/5‑36 (MQ=255)
                                  tACCGCCACTTAATGCCAGCAATGGATATAATCcgg   >  1:3846172/1‑36 (MQ=255)
                                   ACCGCCACTTAATGCCAGCAATGGATATAATCcggc  <  1:6290314‑M1/36‑1 (MQ=255)
                                   ACCGCCACTTAATGCCAGCAATGGATATAATCcggc  >  1:5721261‑M1/1‑36 (MQ=255)
                                   ACCGCCACTTAATGCCAGCAATGGATATAATCcggc  >  1:6479503‑M1/1‑36 (MQ=255)
                                   |                                   
CCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGC  >  REL606/1241494‑1241564

Base quality scores:  ATCG  < 3 ≤  ATCG  < 13 ≤  ATCG  < 23 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG