New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 308482 =44 (0.720)9 (0.150) 6/70 NT 20.2% coding (554/606 nt) yahD predicted transcriptional regulator with ankyrin domain
?REL606 1580990 = 27 (0.440)coding (757/1389 nt) yneI predicted aldehyde dehydrogenase

GGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAA  >  REL606/1580955‑1581025
                                   |                                   
ggTATTATGATAACGTCCGGCTACCGCCGCTTTCAc                                     >  1:7750275/1‑36 (MQ=255)
 ttATTCTGATAACGTCCGGCTGCCGCCGCTTTCAcc                                    <  1:5497522/35‑1 (MQ=255)
 gTATTCTGATAACGTCCGGCTACCGCCGCTTTCAcc                                    >  1:3595173/1‑36 (MQ=255)
 gTATTCTGAAAACGCCCGGCTCCCGCCGCTTTCAcc                                    <  1:1231477/36‑1 (MQ=25)
  tATTCTGATAACGTCCGGCTACCGCCGCTTTCACCg                                   >  1:6184206/1‑36 (MQ=255)
   aTTCTGATAACGTCCGGCTACCGCCGCTTTCACCGc                                  >  1:4155679/1‑36 (MQ=255)
     tCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCa                                >  1:3124764/1‑36 (MQ=255)
      cTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAg                               >  1:629839/1‑36 (MQ=255)
       tGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGt                              >  1:5118512/1‑36 (MQ=255)
        gATAACGTCCGGCTACCGCCGTTTTCACCGCCAGtt                             >  1:6085283/1‑36 (MQ=255)
        gATAACGTCCGGCTACCGCCGCTTTCACCGCCAGtt                             >  1:2006871/1‑36 (MQ=255)
        gATAACGTCCGGCTACCGCCGCTTTCACCGCCAGtt                             >  1:3846703/1‑36 (MQ=255)
           aaCGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCa                          >  1:2946627/1‑36 (MQ=255)
           aaCGTCCGGCTACCGCCGCTTTAACCGCAAGTTCCa                          >  1:4570945/1‑36 (MQ=37)
              gTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGAt                       >  1:6658230/1‑36 (MQ=255)
              gTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGAt                       >  1:3128800/1‑36 (MQ=255)
               tCCGGCTACCGCCGCGGTCACCGCCAGTTCAAGCTc                      >  1:1018582/1‑36 (MQ=19)
                ccGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCg                     >  1:6842081/1‑36 (MQ=255)
                  ggCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGc                   >  1:635840/1‑36 (MQ=255)
                    cTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCAt                 >  1:1648168/1‑36 (MQ=255)
                      aCCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCg               >  1:4076848/1‑36 (MQ=255)
                        cgccgcTTTCACCGCCAGTTCCAGATCGGCATCGtt             >  1:412857/1‑36 (MQ=255)
                        cgccgcTTTCACCGCCAGTTCCAGATCGGCATCGtt             >  1:583323/1‑36 (MQ=255)
                        cgccgcTTTCACCGCCAGTTCCAGATCGGCATCGtt             >  1:2518377/1‑36 (MQ=255)
                         cccccttcccCCGCCAGTTCCAGATCGGCATCGTTa            <  1:942449‑M2/26‑1 (MQ=255)
                         accgcTCACACCGCCAGTTCCAGATCGGCATCGTTa            <  1:4613571/35‑1 (MQ=21)
                          ccgcTTTCACCGCCAGTTCCAGATCGGCATCGTTaa           >  1:5455047/1‑36 (MQ=255)
                          ccccttcccCCGCCAGTTCCAGATCGGCATCGTTaa           <  1:6984931‑M2/27‑1 (MQ=255)
                          ccccttcccCCGCCAGTTCCAGATCGGCATCGTTaa           <  1:2748836‑M2/27‑1 (MQ=255)
                              tttCACCGCCAGTTCCAGATCGGCATCGTTAAGcac       >  1:2743865/1‑36 (MQ=255)
                              ttcccCCGCCAGTTCCAGATCGGCATCGTTAAGcac       <  1:1470426‑M2/31‑1 (MQ=255)
                               tcctCCGCCAGTTCCAGATCGGCATCGTTAAGcaca      <  1:6442487‑M2/32‑1 (MQ=255)
                               tcccCCGCCAGTTCCAGATCGGCATCGTTAAGcaca      <  1:2041277‑M2/32‑1 (MQ=255)
                                tCACCGCCAGTTCCAGATCGGCATCGTTAAGCACaa     >  1:778409/1‑36 (MQ=255)
                                cccCCGCCAGTTCCAGATCGGCATCGTTAAGCACaa     <  1:6447038‑M2/33‑1 (MQ=255)
                                 ccCCGCCAGTTCCAGATCGGCATCGTTAAGCACAAt    <  1:2326155‑M2/34‑1 (MQ=255)
                                 ccCCGCCAGTTCCAGATCGGCATCGTTAAGCACAAt    <  1:4244066‑M2/34‑1 (MQ=255)
                                   ccGCCAGTTCCAGATCGGCATCGTTAAGCACAATaa  <  1:2585338/36‑1 (MQ=255)
                                   ccGCCAGTTCCAGATCGGCATCGTTAAGCACAATaa  >  1:2684409/1‑36 (MQ=255)
                                   ccGCCAGTTCCAGATCGGCATCGTTAAGCACAATaa  <  1:2818611/36‑1 (MQ=255)
                                   |                                   
GGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAA  >  REL606/1580955‑1581025

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 19 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG