Predicted mutation
evidence seq id position mutation freq annotation gene description
RA REL606 3,248,957 A→T 100% D764E (GAT→GAA infB ← translation initiation factor IF‑2

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6063,248,9570A→T100.0% 306.1 852292infBtranslation initiation factor IF‑2
Reads supporting (aligned to +/- strand):  new base (45/39):  ref base (0/0):  total (46/39)

AATCAGGTTATAGATGACGGAGTAGTAACGCAGATCCAGGCTTTCCGCTTCAATCACTTTACGTGC  >  REL606/3248924‑3248989
                                 |                                
aaTCAGGTTATAGATGACGGAGTAGTAACGCAGTTc                                >  1:5237944/1‑36 (MQ=255)
aaTCAGGTTATAGATGACGGAGTAGTAACGCAGTTc                                >  1:1274343/1‑36 (MQ=255)
 aTCAGGTTATAGATGACGGAGTAGTAACGCAGTTcc                               >  1:1986251/1‑36 (MQ=255)
 aTCAGGTTATAGATGACGGAGTAGTAACGCAGTTcc                               >  1:4590561/1‑36 (MQ=255)
 aTCAGGTTATAGATGACGGAGTAGTAACGCAGTTcc                               >  1:4574046/1‑36 (MQ=255)
  tCAGGTTATAGATGACGGAGTAGTAACGCAGTTCCa                              <  1:2190566/36‑1 (MQ=255)
  tCAGGTTATAGATGACGGAGTAGTAACGCAGTTCCa                              <  1:5778531/36‑1 (MQ=255)
  tCAGGTTATAGATGACGGAGTAGTAACGCAGTTCCa                              >  1:564351/1‑36 (MQ=255)
   cAGGTTATAGATGACGGAGTAGTAACGCAGTTCCAg                             <  1:2829415/36‑1 (MQ=255)
   cAGGTTATAGATGACGGAGTAGTAACGCAGTTCCAg                             <  1:6436081/36‑1 (MQ=255)
   cAGGTTATAGATGACGGAGTAGTAACGCAGTTCCAg                             >  1:6267735/1‑36 (MQ=255)
   cAGGTTATAGATGACGGAGTAGTAACGCAGTTCCAg                             <  1:575807/36‑1 (MQ=255)
    aGGTTATAGATGACGGAGTAGTAACGCAGTTCCAgt                            <  1:6525231/36‑2 (MQ=255)
    aGGTTATAGATGACGGAGTAGTAACGCAGTTCCAgg                            >  1:4668104/1‑36 (MQ=255)
    aGGTTATAGATGACGGAGTAGTAACGCAGTTCCAgg                            <  1:2031599/36‑1 (MQ=255)
     gtttATAGATGACGGAGTAGTAACGCAGTTCCAGGc                           <  1:5038570/34‑1 (MQ=38)
     ggTTATAGATGACGGAGTAGTAACGCAGTTCCAGGc                           >  1:6554991/1‑36 (MQ=255)
     ggTTATAGATGACGGAGTAGTAACGCAGTTCCAGGc                           >  1:602310/1‑36 (MQ=255)
       ttATAGATGACGGAGTAGTAACGCAGTTCCAGGCtt                         <  1:5891423/36‑1 (MQ=255)
       ttATAGATGACGGAGTAGTAACGCAGTTCCAGGCtt                         >  1:6985651/1‑36 (MQ=255)
       ttATAGAGGAAGGAGTAGTAACGCAGTTCCAGGCtt                         >  1:6589156/1‑36 (MQ=25)
        tataGATGACGGAGTAGTAACGCAGTTCCAGGCttt                        >  1:5138819/1‑36 (MQ=255)
        tataGATGACGGAGTAGTAACGCAGTTCCAGGCttt                        >  1:6365491/1‑36 (MQ=255)
        tataGATGACGGAGTAGTAACGCAGTTCCAGGCttt                        <  1:3495147/36‑1 (MQ=255)
        tataGATGACGGAGTAGTAACGCAGTTCCAGGCttt                        >  1:6765367/1‑36 (MQ=255)
        tataGATGACGGAGTAGAAAAGCAGTTCCAGGCttt                        >  1:2346718/1‑36 (MQ=25)
         ataGATGACGGAGTAGTAACGCGGTTCCAGGCTTTc                       >  1:5569138/1‑36 (MQ=37)
         ataGATGACGGAGTAGTAACGCAGTTCCAGGCTTTc                       >  1:440294/1‑36 (MQ=255)
          taGATGACGGAGTAGTAACGCAGTTCCAGGCTTTcc                      <  1:4679877/36‑1 (MQ=255)
          taGATGACGGAGTAGTAACGCAGTTCCAGGCTTTcc                      <  1:988851/36‑1 (MQ=255)
          taGATGACGGAGTAGTAACGCAGTTCCAGGCTTTcc                      <  1:1853514/36‑1 (MQ=255)
          taGATGACGGAGTAGTAACGCAGTTCCAGGCTTTcc                      <  1:2336975/36‑1 (MQ=255)
           aGATGACGGAGTAGTAACGCAGTTCCAGGCTTTCCg                     >  1:4084393/1‑36 (MQ=255)
           aGATGACGGAGTAGTAACGCAGTTCCAGGCTTTCCg                     <  1:1965229/36‑1 (MQ=255)
           aGATGACGGAGTAGTAACGCAGTTCCAGGCTTTCCg                     >  1:8111/1‑36 (MQ=255)
            gATGGCGGAGTAGTAACGCAGTTCCAGGCTTTCCGc                    <  1:7900689/36‑1 (MQ=37)
            gATGACGGAGTAGTAACGCAGTTCCAGGCTTTCCGc                    >  1:5750756/1‑36 (MQ=255)
            gATGACGGAGTAGTAACGCAGTTCCAGGCTTTCCGc                    >  1:3844506/1‑36 (MQ=255)
            gATGACGGAGTAGTAACGCAGTTCCAGGCTTTCCGc                    >  1:7498873/1‑36 (MQ=255)
            gATGACGGAGTAGTAACGCAGTTCCAGGCTTTCCGc                    <  1:2337184/36‑1 (MQ=255)
             aTGACGGAGTAGTAACGCAGTTCCAGTATTTACGCt                   >  1:3983078/1‑36 (MQ=19)
             aTGACGGAGTAGTAACGCAGTTCCAGGCTTTCCGCt                   <  1:3343648/36‑1 (MQ=255)
             aTGACGGAGTAGTAACGCAGTTCCAGGCTTTCCGCt                   <  1:4577067/36‑1 (MQ=255)
              tGACGGAGTAGTAACGCAGTTCCAGGCTTTCCGCtt                  <  1:6703457/36‑1 (MQ=255)
              tGACGGAGTAGTAACGCAGTTCCAGGCTTTCCGCtt                  >  1:7909139/1‑36 (MQ=255)
               gACGGAGTAGTAACGCAGTTCCAGGCTTTCCGCTTc                 <  1:231453/36‑1 (MQ=255)
               gACGGAGTAGTAACGCAGTTCCAGGCTTTCCGCTTc                 <  1:2404005/36‑1 (MQ=255)
               gACGGAGTAGTAACGCAGTTCCAGGCTTTCCGCTTc                 >  1:240523/1‑36 (MQ=255)
                aCGGAGTAGTAACGCGGTTCCAGGCTTTCCGCTTCa                >  1:5090484/1‑36 (MQ=37)
                aCGGAGTAGTAACGCAGTTCCAGGCTTTCCGCTTCa                <  1:1404708/36‑1 (MQ=255)
                aCGGAGTAGTAACGCAGTTCCAGGCTTTCCGCTTCa                >  1:6299272/1‑36 (MQ=255)
                aCGGAGTAGTAACGCAGTTCCAGGCTTTCCGCTTCa                >  1:4494270/1‑36 (MQ=255)
                 cGGAGTAGTAACGCAGTTCCAGGCTTTCCGCTTCaa               >  1:7543697/1‑36 (MQ=255)
                 cGGAGTAGTAACGCAGTTCCAGGCTTTCCGCTTCaa               >  1:2661757/1‑36 (MQ=255)
                 cGGAGTAGTAACGCAGTTCCAGGCTTTCCGCTTCaa               <  1:45908/36‑1 (MQ=255)
                  ggAGTAGTAACGCAGTTCCAGGCTTTCCGCTTCAAt              >  1:4262145/1‑36 (MQ=255)
                   gAGTAGTAACGCAGTTCCAGGCTTTCCGCTTCAATc             >  1:1525850/1‑36 (MQ=255)
                    agtagtAACGCAGTTCCAGGCTTTCCGCTTCAATCa            <  1:7519606/36‑1 (MQ=255)
                    agtagtAACGCAGTTCCAGGCTTTCCGCTTCAATCa            <  1:7900288/36‑1 (MQ=255)
                    agtagtAACGCAGTTCCAGGCTTTCCGCTTCAATCa            <  1:4447572/36‑1 (MQ=255)
                    agtagtAACGCAGGTCCAGGCTTTCAGATTCAATCa            >  1:2579777/1‑36 (MQ=25)
                     gtagtaACGCAGTTCCAGGCTTTCCGCTTCAATCAc           <  1:1528914/36‑1 (MQ=255)
                     gtagtaACGCAGTTCCAGGCTTTCCGCTTCAATCAc           <  1:3356370/36‑1 (MQ=255)
                      tagtaACGCAGTTCCAGGCTTTCCGCTTCAATCACt          <  1:6540847/36‑1 (MQ=255)
                      tagtaACGCAGTTCCAGGCTTTCCGCTTCAATCACt          <  1:1677132/36‑1 (MQ=255)
                      tagtaACGCAGTTCCAGGCTTTCCGCTTCAATCACt          <  1:4591549/36‑1 (MQ=255)
                      tagtaACGCAGTTCCAGGCTTTCCGCTTCAATCACt          >  1:6090424/1‑36 (MQ=255)
                       agtaACGCAGTTCCAGGCTTTCCGCTTCAATCACtt         <  1:5822452/36‑1 (MQ=255)
                        gtaACGCAGTTCCAGGCTTTCCGCTTCAATCACttt        >  1:6231423/1‑36 (MQ=255)
                         taACGCAGTTCCAGGCTTTCCGCTTCAATCACTTTa       >  1:2513426/1‑36 (MQ=255)
                          aaCTCAGTTCCAGGCTTTCCGCTTCAATCACtttcc      <  1:3167468/36‑3 (MQ=25)
                          aaCGCAGTTCCAGGCTTTCCGCTTCAATCACTTTAc      >  1:6453037/1‑36 (MQ=255)
                          aaCGCAGTTCCAGGCTTTCCGCTTCAATCACTTTAc      <  1:6578977/36‑1 (MQ=255)
                          aaCGCAGTTCCAGGCTTTCCGCTTCAATCACTTTAc      <  1:4758490/36‑1 (MQ=255)
                          aaCGCAGTTCCAGGCTTTCCGCTTCAATAACTTTAc      >  1:6380135/1‑36 (MQ=37)
                           aCGCAGTTCCAGGCTTTCCTCTTCAATCACTTTACg     >  1:5228339/1‑36 (MQ=37)
                            cGCAGTTCCAGGCTTTCCGCTTCAATCACTTTACGt    >  1:1106083/1‑36 (MQ=255)
                            cGCAGTTCCAGGCTTTCCGCTTCAATCACTTTACGt    <  1:2536023/36‑1 (MQ=255)
                            cGCAGTTCCAGGCTTTCCGCTTCAATCACTTTACGt    <  1:7400228/36‑1 (MQ=255)
                            cGCAGTTCCAGGCTTGTCGGTTCAACCAATCTACGt    >  1:6525801/1‑36 (MQ=2)
                             gCAGTTCCAGGCTTTCCGCTTCAATCACTTTACGTg   >  1:1236285/1‑36 (MQ=255)
                             gCAGTTCCAGGCTTTCCGCTTCAATCACTTTACGTg   >  1:2160841/1‑36 (MQ=255)
                              cAGTTCCAGGCTTTCCGCTTCAATCACTTTACGttc  <  1:7111702/36‑3 (MQ=37)
                              cAGTTCCAGGCTTTCCGCTTCAATCACTTTACGTGc  >  1:7301329/1‑36 (MQ=255)
                              cAGTTCCAGGCTTTCCGCTTCAATCACTTTACGTGc  >  1:2848564/1‑36 (MQ=255)
                                 |                                
AATCAGGTTATAGATGACGGAGTAGTAACGCAGATCCAGGCTTTCCGCTTCAATCACTTTACGTGC  >  REL606/3248924‑3248989

Base quality scores:  ATCG  < 3 ≤  ATCG  < 13 ≤  ATCG  < 24 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG