New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 555924 =0 (0.000)20 (0.380) 18/62 NT 100% coding (1209/2346 nt) ECB_00513 conserved hypothetical protein
?REL606 = 2035093 NA (NA)noncoding (1/768 nt) IS1 repeat region

CCTGATTTATTAATGTATGTTGCACCTGATGCGCGTTTG...................................  <  REL606/555962‑555924
...................................TTTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT  <  REL606/2035093‑2035059
                                                                          
    ATTTATTAATGTATGTTGCACCTGATGCGCGTTTGG                                    >  1:1388893/1‑36 (MQ=1)
    ATTTATTAATGTATGTTGCACCTGATGCGCGTTTGG                                    >  1:3076824/1‑36 (MQ=1)
       TATTAATGTATGTTGCACCTGATGCGCGTTTGGGTG                                 >  1:7537848/1‑36 (MQ=1)
       TATTAATGTATGTTGCACCTGATGCGCGTTTGGGTG                                 >  1:552014/1‑36 (MQ=1)
        ATTAATGTATGTTGCACCTGATGCGCGTTTGGGTGA                                >  1:5376087/1‑36 (MQ=1)
          TAATGTATGTTGCACCTGATGCGCGTTTGGGTGATG                              <  1:2367388/36‑1 (MQ=1)
           AATGTATGTTGCACCTGATGCGCGTTTGGGTGATGC                             >  1:7013093/1‑36 (MQ=1)
            ATGTATGTTGCACCTGATGCGCGTTTGGGTGATGCT                            >  1:5860097/1‑36 (MQ=1)
                ATGTTGCACCTGATGCGCGTTTGGGTGATGCTGCCA                        >  1:5620997/1‑36 (MQ=1)
                  GTTGCACCTGATGCGCGTTTGGGTGATGCTGCCAAC                      <  1:5390266/36‑1 (MQ=1)
                   TTGAACCTGATGCGCGTTTGGGTGATGCTGCCAACT                     >  1:4881685/1‑36 (MQ=0)
                    TGCACCTGATGCGCGTTTGGGTGATGCTGCCAACTT                    >  1:7462964/1‑36 (MQ=1)
                      CACCTGATGCGCGTTTGGGTGATGCTGCCAACTTAC                  <  1:6381789/36‑1 (MQ=1)
                       ACCTGATGCGCGTTTGGGTGATGCTGCCAACTTACT                 <  1:3631579/36‑1 (MQ=1)
                         CTGATGCGCGTTTGGGTGATGCTGCCAACTTACTGA               >  1:7776312/1‑36 (MQ=1)
                            ATGCGCGTTTGGGTGATGCTGCCAACTTACTGATTT            >  1:1910311/1‑36 (MQ=1)
                             TGCGCGTTTGGGTGATGCTGCCAACTTACTGATTTA           >  1:557382/1‑36 (MQ=1)
                               CGCGTTTGGGTGATGCTGCCAACTTACTGATTTAGT         >  1:3377415/1‑36 (MQ=1)
                               CGCGTTTGGGTGATGCTGCCAACTTACTGATTTAGT         <  1:2214560/36‑1 (MQ=1)
                                 CGTTTGGGTGATGCTGCCAACTTACTGATTTAGTGT       <  1:4863683/36‑1 (MQ=1)
                                                                          
CCTGATTTATTAATGTATGTTGCACCTGATGCGCGTTTG...................................  <  REL606/555962‑555924
...................................TTTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT  <  REL606/2035093‑2035059

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG