New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1106052 | 31 (0.600) | 4 (0.080) | 4/60 | NT | 8.5% | coding (91/2019 nt) | ycdR | predicted enzyme associated with biofilm formation |
? | REL606 | 3572096 = | 55 (0.920) | coding (545/1470 nt) | yhiP | predicted transporter |
ACGGTTGCTCGGCGAGTAAAGATTCGCGATCCTGTGGCGG................................... > REL606/1106013‑1106052
...................................GGCGGGGTTAATTATCGCATTACTGGTTTACATCGCCTGT > REL606/3572096‑3572130
GCGAGTAAAGATTCGCGATCCTGTGGCGGGGTTAAT > 1:1425360/1‑36 (MQ=255)
CGAGTAAAGATTCGCGATCCTGTGGCGGGGTTAATT > 1:6252926/1‑36 (MQ=255)
GAGTAAAGATTCGCGATCCTGTGGCGGGGTTAATTA > 1:2002086/1‑36 (MQ=255)
AGTAAAGATTCGCGATCCTGTGGCGGGTTTAATTAT > 1:1284136/1‑36 (MQ=255)
ACGGTTGCTCGGCGAGTAAAGATTCGCGATCCTGTGGCGG................................... > REL606/1106013‑1106052
...................................GGCGGGGTTAATTATCGCATTACTGGTTTACATCGCCTGT > REL606/3572096‑3572130
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 6 ≤
ATCG
< 7 ≤
ATCG
< 30 ≤
ATCG
< 37 ≤
ATCG
|