New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 103607332 (0.580)13 (0.240) 8/62 NT 29.2% intergenic (+45/+31) ycbG/ompA hypothetical protein/outer membrane protein A (3a;II*;G;d)
?REL606 = 2540943 31 (0.500)coding (38/1290 nt) uraA uracil transporter

AAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGC...................................  >  REL606/1036035‑1036073
...................................CCGCCACTTTTACAGACAATCCCGCTTAGTTTGCAACAT  <  REL606/2540943‑2540909
                                                                          
                        tAAAAAAACCCCCGCCACTTTTACAGACAATCCCGC                <  1:1708648/35‑1 (MQ=255)
                        gAAAAAAAACCCCGCCACTTTTACAGACAATCCCGC                <  1:2306861/35‑1 (MQ=255)
                         AAAAAAAACCCCGCCACTTTTACAGACAATCCCGCT               <  1:1583209/36‑1 (MQ=255)
                          AAAAAAACCCCGCCACTTTTACAGACAATCCCGCTT              <  1:7486222/36‑1 (MQ=255)
                           AAAAACCCCCGCCACTTTTACAGACAATCCCGCTTA             <  1:2930571/36‑1 (MQ=255)
                             AAAACCCCGCCACTTTTACAGACAATCCCGCTTAGT           <  1:1238290/36‑1 (MQ=255)
                              AAACCCCGCCGCTTTTACAGACAATCCCGCTTAGTT          <  1:5021735/36‑1 (MQ=255)
                              AAACACCGCCACTTTTACAGACAATCCCGCTTAGTT          <  1:3720414/36‑1 (MQ=255)
                               AACCCCGCCACTTTTACAGACAATCCCGCTTAGTTT         <  1:2443193/36‑1 (MQ=255)
                               AACACCGCCACTTTTACAGACAATCCCGCTTAGTTT         <  1:6808376/36‑1 (MQ=255)
                                ACCCCGCCACTTTTACAGACAATCCCGCTTAGTTTG        <  1:2327320/36‑1 (MQ=255)
                                ACCCCGCCACTTTTACAGACAATCCCGCTTAGTTTG        <  1:78936/36‑1 (MQ=255)
                                 CCCCGCCACTTTTACAGACAATCCCGCTTAGTTTGC       <  1:4790121/36‑1 (MQ=255)
                                                                          
AAAGTCAGTTCAATTTACTAAAGGCAAAAAAAACCCCGC...................................  >  REL606/1036035‑1036073
...................................CCGCCACTTTTACAGACAATCCCGCTTAGTTTGCAACAT  <  REL606/2540943‑2540909

Base quality scores:  ATCG  < 3 ≤  ATCG  < 6 ≤  ATCG  < 14 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG