New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 417727 =39 (0.820)6 (0.130) 5/54 NT 15.2% coding (682/891 nt) cyoE protoheme IX farnesyltransferase
?REL606 1333598 = 28 (0.450)pseudogene (67/129 nt) yciX predicted protein; b4522(b4574)

ATCGCCTTTGCCGTTGCCACGCTGATGCTCTCTCTTGGCGGTT..................................  <  REL606/417769‑417727
...................................TGGCGGTTTTTCTTGGTTCTGCACTTTTCTGGGTGGTTGTCG  >  REL606/1333598‑1333631
                                                                             
        TGCCGTTGCCACGCTGATGCTCTCTCTTGGCGGTTT                                   >  1:1364483/1‑36 (MQ=255)
          CCGTTGCCACGCTGATGCTCTCTCTTGGCGGTTTTT                                 >  1:2850123/1‑36 (MQ=255)
           CGTTGCCACGCTGATGCTCTCTCTTGGCGGTTTTTt                                >  1:3700259/1‑35 (MQ=255)
            GTTGCCACGCTGATGCTCTCTCTTGGCGGTTTTTCT                               >  1:3143853/1‑36 (MQ=255)
               GCCACGCTGATGCTCTCTCTTGGCGGTTTTTCTGGG                            >  1:2116308/1‑36 (MQ=255)
                 CACGCTGATGCTCTCTCTTGGCGGTTTTTCTTGGTT                          >  1:2070191/1‑36 (MQ=255)
                                                                             
ATCGCCTTTGCCGTTGCCACGCTGATGCTCTCTCTTGGCGGTT..................................  <  REL606/417769‑417727
...................................TGGCGGTTTTTCTTGGTTCTGCACTTTTCTGGGTGGTTGTCG  >  REL606/1333598‑1333631

Base quality scores:  ATCG  < 3 ≤  ATCG  < 4 ≤  ATCG  < 10 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG