Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC REL606 1,733,647 IS150 (–) +3 bp 18.4% coding (683‑685/1413 nt) pykF → pyruvate kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 588495 =NA (NA)9 (0.180) 9/62 NT 20.9% noncoding (1/1977 nt) IS150 repeat region
?REL606 1733647 = 34 (0.590)coding (683/1413 nt) pykF pyruvate kinase
* ? REL606 = 666130NA (NA)7 (0.130) 7/68 NT 15.9% noncoding (1443/1443 nt) IS150 repeat region
?REL606 = 1733649 37 (0.640)coding (685/1413 nt) pykF pyruvate kinase

ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAC..................................  <  REL606/588531‑588495
...................................CAACAACTTCGACGAAATCCTCGAAGCCTCTGACGGCA  >  REL606/1733647‑1733682
                                                                         
    CATTTCATCGTCCAACAAAATGGGTGCAGTACAACA                                   <  1:1508495/36‑1 (MQ=255)
                  ACAAAATGGGTGCAGTACAACAACTTCGACGAAATC                     <  1:7311324/36‑1 (MQ=255)
                    AAAATGGGTGCAGTACAACAACTTAGACGAAATCCT                   >  1:4768149/1‑36 (MQ=255)
                        TGGGTGCAGTACAACAACTTCGACGAAATCCTCGAA               <  1:3901353/36‑1 (MQ=1)
                        TGGGTGCAGTACAACAACTTCGACGAAATCCTCGAA               >  1:4258695/1‑36 (MQ=1)
                          GGTGCAGTACAACAACTTCGACGAAATCCTCGAAGC             >  1:4314115/1‑36 (MQ=1)
                             GCAGTACAACAACTTCGACGAAATCCTCGAAGCCTC          >  1:3549145/1‑36 (MQ=1)
                             GCAGTACAACAACTTCGACGAAATCCTCGAAGCCTC          <  1:5504536/36‑1 (MQ=1)
                                GTACAACAACTTCGACGAAATCCTCGAAGCCTCTGA       >  1:5748832/1‑36 (MQ=1)
                                                                         
ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACAAC..................................  <  REL606/588531‑588495
...................................CAACAACTTCGACGAAATCCTCGAAGCCTCTGACGGCA  >  REL606/1733647‑1733682

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 26 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG