Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6061,485,4500A→G 7.1% 0.8 ‑5.4 0.088579ydcVpredicted spermidine/putrescine transporter subunit
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (8/1):  ref base (30/49):  total (38/50)
Fisher's exact test strand distribution p-value = 4.56e-03
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00

Only 100 of 108 total aligned reads displayed.

GTGTTGCCGAATCTCAGTTCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCGATGAAAT  >  REL606/1485415‑1485485
                                   |                                   
gtgtTGCCGACTCTCAGTTTGGCGTTACTGGCagga                                     <  1:5169970/36‑1 (MQ=37)
gtgtTGCCGAATCTCAGTTCGGCGTTACTGGCagga                                     >  1:7659299/1‑36 (MQ=255)
 tgtTGCCGAATCTCAGTTCGGCGTTACTGGCaggag                                    <  1:6690163/36‑1 (MQ=255)
  gtTGCCGAATCTCAGTTCGGCGTTACTGGCaggagg                                   >  1:2961085/1‑36 (MQ=255)
  gtTGCCGAATCTCAGTTCGCCGTTACTGGCaggggg                                   >  1:3526795/1‑36 (MQ=37)
    tGCCGAATCTCAGTTCGGCGTTACTGGCagggggga                                 >  1:1481145/1‑34 (MQ=37)
    tGCCGAATCTCAGTTCGGCGTTACTGGCAGGAGGaa                                 <  1:7454896/36‑1 (MQ=255)
    tGCCGAATCTCAGTTCGGCGTTACTGGCAGGAGGaa                                 >  1:2513592/1‑36 (MQ=255)
     gCCGAATCTCAGTTCGGCGTTACTGGCAGGGGGGAt                                >  1:4600457/1‑36 (MQ=37)
     gCCGAATCTCAGTTCGGCGTTACTGGCAGGGGGAAt                                >  1:5594667/1‑36 (MQ=255)
     gCCGAATCTCAGTTCGGCGTTACTGGCAGGAGGAAt                                <  1:4333834/36‑1 (MQ=255)
       cGAATCTCAGTTCGGCGTTACTGGCAGGGGGAATGc                              >  1:2280138/1‑36 (MQ=255)
       cGAATCTCAGTTCGGCGTTACTGGCAGGAGGAATGc                              <  1:325817/36‑1 (MQ=255)
       cGAATCACAGTTCGGCGTTACGGGCAGGAGGAATGc                              <  1:7592458/36‑1 (MQ=38)
         aaTCTCAGTTCGGCGTTACTGGCAGGAGGAATGCTg                            >  1:6133918/1‑36 (MQ=255)
         aaTCTCAGTTCGGCGTTACTGGCAGGAGGAATGCTg                            >  1:1037915/1‑36 (MQ=255)
          aTCTGAGTTCGGCGTTACTGGCAGGAGGAATGCTgg                           <  1:7238082/36‑1 (MQ=255)
          aTCTCAGTTCGGCGTTACTGGCAGGAGGAATGCTgg                           <  1:4290743/36‑1 (MQ=255)
           tctcAGTTCGGCGTTACTGGCAGGAGGAATGCTGGc                          >  1:6424998/1‑36 (MQ=255)
           tctcAGTTCGGCGTTACTGGCAGGAGGAATGCTGGc                          >  1:2436434/1‑36 (MQ=255)
           tctcAGTTCGGCGTTAATGGCAGGAGGGATGATGGc                          >  1:6585527/1‑36 (MQ=25)
           tctcAGTTCCGTGTTTCTGGCAGGAGGAATGCTGGc                          <  1:4028539/36‑1 (MQ=25)
            ctcAGTTCGGCGTTACTGGCAGGAGGAATGCTGGCg                         >  1:6104782/1‑36 (MQ=255)
             tcAGTTCGGCGTTACTGGCAGGGGGAATGCTGGGGt                        >  1:2519013/1‑36 (MQ=37)
             tcAGTTCGGCGCTGCTGGCAGGAGGAATGCTGGCGt                        <  1:16251/36‑1 (MQ=37)
              cAGTTCGGCGTTACTGGCAGGAGGAATGCTGGCGtt                       <  1:601983/36‑1 (MQ=255)
               aGTTCGGCGTTACTGGCAGGAGGTATGATGGCGttt                      >  1:5984543/1‑36 (MQ=25)
               aGTTCGGCGTTACTGGCAGGAGGAATGCTGGCGttt                      <  1:6935419/36‑1 (MQ=255)
                gTTCGGCGTTACTGGCCGGAGGAATGCTGGCGTTTg                     <  1:3243222/36‑1 (MQ=255)
                gTTCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTg                     <  1:3808284/36‑1 (MQ=255)
                gTTCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTg                     >  1:5509828/1‑36 (MQ=255)
                gTTCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTg                     <  1:6694808/36‑1 (MQ=255)
                gTTCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTg                     >  1:7434136/1‑36 (MQ=255)
                 ttCGGCGTTACTGGCAGGGGGAATTCTGGGGttttt                    >  1:4612080/1‑34 (MQ=18)
                 ttCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTGc                    <  1:7660457/36‑1 (MQ=255)
                 ttCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTGc                    <  1:1311197/36‑1 (MQ=255)
                 ttCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTGc                    <  1:6180341/36‑1 (MQ=255)
                 ttCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTGc                    >  1:7538553/1‑36 (MQ=255)
                 ttCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTGc                    <  1:7521201/36‑1 (MQ=255)
                 ttCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTGc                    <  1:7436618/36‑1 (MQ=255)
                 ttCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTGc                    >  1:716516/1‑36 (MQ=255)
                  tCGGCGTTACTGGCAGGGGGAATGCTGGCGTTTTcc                   >  1:3885348/1‑36 (MQ=37)
                  tCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTGcc                   >  1:1175088/1‑36 (MQ=255)
                   cGGCGTTACTGGCAGGGGGAATGCTGGCGTTTGGCt                  >  1:1344954/1‑36 (MQ=25)
                   cGGCGTTACTGGCAGGAGGAATGCTGGCGTTTGCCt                  <  1:5329566/36‑1 (MQ=255)
                    tgCGTTACTGGCAGGATGAATGCTGGCGTTTGCCtt                 <  1:1349133/35‑1 (MQ=255)
                    ggCGTTACTGGCAGGAGGAATGCTGGCGTTTGCCtt                 <  1:4823763/36‑1 (MQ=255)
                     gggTTACTGGCAGGAGGAATGCTGGCGTTTGCCTTg                <  1:6277650/34‑1 (MQ=255)
                      cGTTACTGGCAGGAGGGATGCTGGCGTTTGCCtttt               >  1:1809750/1‑34 (MQ=37)
                      cGTTACTGGCAGGAGGAATGCTGGCGTTTGCCtttt               >  1:7156464/1‑34 (MQ=255)
                      cGTTACTGGCAGGAGGAATGCTGGCGTTTGCCTTGt               >  1:1265533/1‑36 (MQ=255)
                       gTTACTGGCAGGAGGAATGCTGGCGTTTGCCTTGTc              >  1:3276313/1‑36 (MQ=255)
                       gTTACTGGCAGGAGGAATGCTGGCGTTTGCCTTGTc              <  1:325433/36‑1 (MQ=255)
                       gTTACTGGCAGGAGGAATGCTGGCGTTTGCCTTGTc              >  1:3594454/1‑36 (MQ=255)
                       gTTACTGGCAGGAGGAATGCTGGCGTTTGCCTTGTc              >  1:7188833/1‑36 (MQ=255)
                       gTTACTGGCAGGAGGAATGCTGGCGTTTGCCTTGTc              <  1:2719077/36‑1 (MQ=255)
                       gTTACTGGCAGGAGGAATGCAGGCGTTTGCCTTGTc              <  1:3768308/36‑1 (MQ=255)
                        ttACTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCg             >  1:701931/1‑36 (MQ=255)
                        ttACTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCg             <  1:6521283/36‑1 (MQ=255)
                        ttACTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCg             >  1:5524547/1‑36 (MQ=255)
                         tACTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGt            <  1:5075699/36‑1 (MQ=255)
                         tACTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGt            <  1:6548684/36‑1 (MQ=255)
                          aCTGGCAGGAGGAATGCTGGCGTTTGCCTTGTTGtt           >  1:6393277/1‑36 (MQ=255)
                          aCTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGtt           >  1:3571944/1‑36 (MQ=255)
                          aCTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGtt           <  1:5472830/36‑1 (MQ=255)
                          aCTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGtt           <  1:6547000/36‑1 (MQ=255)
                           cTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTc          <  1:2098519/36‑1 (MQ=255)
                           cTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTc          <  1:2884719/36‑1 (MQ=255)
                           cTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTc          <  1:101208/36‑1 (MQ=255)
                           cTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTc          <  1:1303129/36‑1 (MQ=255)
                           cTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTc          <  1:4531513/36‑1 (MQ=255)
                            tGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCg         <  1:5722593/36‑1 (MQ=255)
                            tGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCg         <  1:5545971/36‑1 (MQ=255)
                            tGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCg         <  1:3567218/36‑1 (MQ=255)
                            tGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCg         <  1:4139061/36‑1 (MQ=255)
                            tGGCAGGAGGAATGATGGCGTTTGCCTTGTCGTTCg         <  1:7381446/36‑1 (MQ=255)
                             ggCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCGa        <  1:6450545/36‑1 (MQ=255)
                             ggCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCGa        <  1:5117353/36‑1 (MQ=255)
                             ggCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCGa        <  1:1337212/36‑1 (MQ=255)
                             ggCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCGa        <  1:3190212/36‑1 (MQ=255)
                              gCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCGAt       <  1:4002576/36‑1 (MQ=255)
                              gCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCGAt       <  1:3430322/36‑1 (MQ=255)
                              gCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCGAt       >  1:1853428/1‑36 (MQ=255)
                              gCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCGAt       <  1:297154/36‑1 (MQ=255)
                              gCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCGAt       >  1:1929693/1‑36 (MQ=255)
                               cAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCGATg      >  1:4549843/1‑36 (MQ=255)
                               cAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCGATg      >  1:60962/1‑36 (MQ=255)
                                aggaggAATGCTGGCGTTTGCCTTGTCGTTCGATGa     >  1:7786727/1‑36 (MQ=255)
                                aggaggAATGCTGGCGTTTGCCTTGTCGTTCGATGa     <  1:7834762/36‑1 (MQ=255)
                                aggaggAATGCTGGCGTTTGCCTTGTCGTTCGATGa     <  1:2588508/36‑1 (MQ=255)
                                aggaggAATGCTGGCGTTTGCCTTGTCGTTCGATGa     <  1:5274760/36‑1 (MQ=255)
                                 ggaggaATGCTGGCGTTTGCCTTGTCGTTCGATGaa    >  1:321896/1‑36 (MQ=255)
                                 ggaggaATGCTGGCGTTTGCCTTGTCGTTCGATGaa    >  1:167229/1‑36 (MQ=255)
                                 ggaggaATGCTGGCGTTTGCCTTGTCGTTCGATGaa    <  1:7775405/36‑1 (MQ=255)
                                  gaggaATGCTGGCGTTTGCCTTGTCGTTCGATGaaa   <  1:2112021/36‑1 (MQ=255)
                                  gaggaATGCTGGCGTTTGCCTTGTCGTTCGATGaaa   >  1:1916988/1‑36 (MQ=255)
                                  gaggaATGCTGGCGTTTGCCTTGTCGTTCGATGaaa   <  1:5356848/36‑1 (MQ=255)
                                  gaggaATGCTGGCGTTTGCCTTGTCGTTCGATGaaa   <  1:5857782/36‑1 (MQ=255)
                                   aggaATGCTGGCGTTTGCCTTGTCGTTCGATGAAat  <  1:516120/36‑1 (MQ=255)
                                   aggaATGCTGGCGTTTGCCTTGTCGTTCGATGAAat  >  1:6045028/1‑36 (MQ=255)
                                   |                                   
GTGTTGCCGAATCTCAGTTCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCGATGAAAT  >  REL606/1485415‑1485485

Base quality scores:  ATCG  < 3 ≤  ATCG  < 10 ≤  ATCG  < 20 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG