New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 16728 | NA (NA) | 4 (0.100) | 4/60 | NT | 15.4% | noncoding (1343/1343 nt) | IS186 | repeat region |
? | REL606 | 2448493 = | 22 (0.490) | intergenic (+24/+26) | nupC/yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
GTTCAACCCTTAAGTTAGCGCTTATGGGAT.................................. > REL606/16701‑16728
.........................GGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCT > REL606/2448493‑2448528
GTTCAACCGTTAAGTTAGCGCTTATGGGATAATTCC < 1:5585479/36‑1 (MQ=255)
TCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCC > 1:1968580/1‑36 (MQ=32)
AAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTT < 1:5170960/36‑1 (MQ=1)
AGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCC < 1:3033985/36‑1 (MQ=1)
GTTCAACCCTTAAGTTAGCGCTTATGGGAT.................................. > REL606/16701‑16728
.........................GGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCT > REL606/2448493‑2448528
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 13 ≤
ATCG
< 18 ≤
ATCG
< 30 ≤
ATCG
< 37 ≤
ATCG
|