New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 592057 | NA (NA) | 5 (0.100) | 5/60 | NT | 10.9% | noncoding (1343/1343 nt) | IS186 | repeat region |
? | REL606 | 1391825 = | 41 (0.680) | coding (230/1614 nt) | mppA | murein tripeptide (L‑ala‑gamma‑D‑glutamyl‑meso‑DAP) transporter subunit |
TCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAG................................... > REL606/592023‑592057
................................GGGAGATTGTCCCCGGCGTTGCGACTCAGTGGAAAAGTAA > REL606/1391825‑1391861
CAACCCTTAAGTTAGCGCTTATGGGAGATTGTCCCC < 1:6483187/36‑1 (MQ=1)
CCTTAAGTTAGCGCTTATGGGAGATTGTCCCCGGCG < 1:2515403/36‑1 (MQ=1)
TATGGGAGATTGTCCCCGGCGTTGCGACTCAGTGGA < 1:6746571/36‑1 (MQ=1)
ATGGGAGATTGTCCCCGGCGTTGCGACTCAGTGGAA < 1:53044/36‑1 (MQ=1)
TGGGAGATTGTCCCCGGCGTTGCGACTCAGTGGAAA < 1:5299704/36‑1 (MQ=1)
TCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAG................................... > REL606/592023‑592057
................................GGGAGATTGTCCCCGGCGTTGCGACTCAGTGGAAAAGTAA > REL606/1391825‑1391861
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 27 ≤
ATCG
< 30 ≤
ATCG
< 35 ≤
ATCG
< 37 ≤
ATCG
|