Predicted mutation
evidence seq id position mutation freq annotation gene description
RA REL606 3,155,168 G→A 100% G296S (GGC→AGC)  ebgR → DNA‑binding transcriptional repressor

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6063,155,1680G→A100.0% 112.3 32886ebgRDNA‑binding transcriptional repressor
Reads supporting (aligned to +/- strand):  new base (18/14):  ref base (0/0):  total (18/14)

GTGCGCATCCATTCCGAGATGATGGGAAGTCAGGGCGTTAACCTGGTGTATGAAAAAGCCCGCGA  >  REL606/3155135‑3155199
                                 |                               
gTGCGCATCCATTCCGAGATGATGGGAAGTCAGAGc                               <  1:4045611/36‑1 (MQ=255)
gTGCGCATCCATTCCGAGATGATGGGAAGTCAGAGc                               <  1:2267463/36‑1 (MQ=255)
 tGCGCATCCATTCCGAGATGATGGGAAGTCAGAGCg                              >  1:651447/1‑36 (MQ=255)
 tGCGCATCCATTCCGAGATGATGGGAAGTCAGAGCg                              >  1:364127/1‑36 (MQ=255)
   cgcATCCATTCCGAGATGATGGGAAGTCAGAGCGtt                            <  1:4718991/36‑1 (MQ=255)
    gcATCCATTCCGAGATGATGGGAAGTCAGAGCGTTa                           >  1:140293/1‑36 (MQ=255)
    gcATCCATTCCGAGATGATGGGAAGTCAGAGCGTTa                           <  1:1722030/36‑1 (MQ=255)
    gcATCCATTCCGAGATGATGGGAAGTCAGAGCGTTa                           >  1:5165724/1‑36 (MQ=255)
    gcATCCATTCCGAGATGAGGGGAAGTCAGAGCGTTa                           <  1:3720418/36‑1 (MQ=38)
     cATCCATTCCGAGATGATGGGAAGTCAGAGCGTTaa                          <  1:4631369/36‑1 (MQ=255)
      aTCCATTCCGAGATGATGGGAAGTCAGAGCGTTAAc                         >  1:4597837/1‑36 (MQ=255)
      aTCCATTCCGAGATGATGGGAAGTCAGAGCGTTAAc                         >  1:349970/1‑36 (MQ=255)
        ccATTCCGAGATGATGGGAAGTCAGAGCGTTAACCt                       >  1:1366187/1‑36 (MQ=255)
         cATTCCGAGATGATGGGAAGTCAGAGCGTTAACCTg                      >  1:315276/1‑36 (MQ=255)
               gagaTGATGGGAAGTCCGAGCGTTAACCTGGTGTAt                <  1:5328946/36‑1 (MQ=37)
                agaTGATGGGAAGTCAGAGCGTTAACCTGGTGTATg               <  1:3472938/36‑1 (MQ=255)
                agaTGATGGGAAGTCAGAGCGTTAACCTGGTGTATg               >  1:5358276/1‑36 (MQ=255)
                 gatgatGGGAAGTCAGAGCGTTAACCTGGTGTATGa              <  1:880911/36‑1 (MQ=255)
                  atgatgGGAAGTCAGAGCGTTAACCTGGTGTATGaa             >  1:5589803/1‑36 (MQ=255)
                  atgatgGGAAGTCAGAGCGTTAACCTGGTGTATGaa             <  1:927577/36‑1 (MQ=255)
                  atgatgGGAAGTCAGAGCGTTAACCTGGTGTATGaa             >  1:1233870/1‑36 (MQ=255)
                    gatgGGAAGTCAGAGCGTTAACCTGGTGTATGaaaa           >  1:489982/1‑36 (MQ=255)
                      ggggAAGTCAGAGCGTTAACCTGGTGTATGAAAAAg         <  1:2352761/35‑1 (MQ=255)
                       gggAAGTCAGAGCGTTAACCTGGTGTATGAAAAAGc        >  1:449631/1‑36 (MQ=255)
                       gggAAGTCAGAGCGTTAACCTGGTGTATGAAAAAGc        <  1:4283682/36‑1 (MQ=255)
                         gAAGTCAGAGCGTTAACCTGGTGTATGAAAAAGccc      >  1:1881314/1‑36 (MQ=255)
                          aaGTCAGAGCGTTAACCTGGTGTATGAAAAAGCCcg     <  1:2231163/36‑1 (MQ=255)
                            gTCAGAGCGTTAACCTGGTGTATGAAAAAGCCcgcg   <  1:5461761/36‑1 (MQ=255)
                            gTCAGAGCGTTAACCTGGTGTATGAAAAAGCCcgcg   >  1:1867479/1‑36 (MQ=255)
                            gTCAGAGCGTTAACCTGGTGTATGAAAAAGCCcgcg   >  1:1750990/1‑36 (MQ=255)
                             tCAGAGCGTTAACCTGGTGTATGAAAAAGCCCGCGa  >  1:4088601/1‑36 (MQ=255)
                             tCAGAGCGTTAACCTGGTGTATGAAAAAGCCCGCGa  >  1:39240/1‑36 (MQ=255)
                                 |                               
GTGCGCATCCATTCCGAGATGATGGGAAGTCAGGGCGTTAACCTGGTGTATGAAAAAGCCCGCGA  >  REL606/3155135‑3155199

Base quality scores:  ATCG  < 3 ≤  ATCG  < 13 ≤  ATCG  < 22 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG