New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 640118 = | 32 (0.630) | 6 (0.120) | 3/62 | NT | 14.0% | intergenic (+36/+19) | cspE/ccrB | cold shock protein E/camphor resistance protein CrcB |
? | REL606 | = 2825478 | 42 (0.730) | coding (741/1629 nt) | ECB_02649 | protein similar to L‑ribulokinase AraB |
GGCCTCAACCGCACACTAAAGACCAAAAAAAAACCCGC................................... < REL606/640155‑640118
..................................CCGCCACAGCTGCTGAAGAGTTAGGATTAACGACTAATG < REL606/2825478‑2825444
gAAACAAAAACCCGCCACAGCTGCTGAAGAGTTAGG < 1:2756904/35‑1 (MQ=255)
gAAAAAAAACCCGCCACAGCTGCTGAAGAGTTAGGA < 1:2611985/35‑1 (MQ=38)
AAAAAAAAACCCGCCACAGCTGCTGAAGAGTTAGGA < 1:116366/36‑1 (MQ=38)
AAAAAAAACCCGCCACAGCTGCTGAAGAGTTAGGAT < 1:4851749/36‑1 (MQ=38)
cAAAACCCGCCACAGCTGCTGAAGAGTTAGGATTAA < 1:7043565/35‑1 (MQ=25)
AAAAACCCGCCACAGCTGCTGAAGAGTTAGGATTAA < 1:2164140/36‑1 (MQ=38)
GGCCTCAACCGCACACTAAAGACCAAAAAAAAACCCGC................................... < REL606/640155‑640118
..................................CCGCCACAGCTGCTGAAGAGTTAGGATTAACGACTAATG < REL606/2825478‑2825444
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 4 ≤
ATCG
< 6 ≤
ATCG
< 27 ≤
ATCG
< 37 ≤
ATCG
|