New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1946059 = | 37 (0.720) | 5 (0.100) | 4/60 | NT | 11.5% | coding (149/390 nt) | cheY | chemotaxis regulator transmitting signal to flagellar motor component |
? | REL606 | = 3240660 | 40 (0.670) | coding (392/1245 nt) | mtr | tryptophan transporter of high affinity |
AGATGGCGTCGACGCTCTCAATAAGTTGCAGGCAGGCGG.................................. < REL606/1946097‑1946059
..................................GGCGGGTTTTGGTTTTGCACTGCTGGTAGCGTTTGTGGT < REL606/3240660‑3240627
GTCGACGCTCTCAATAAGTTGCAGGCAGGCGGGTTT > 1:989506/1‑36 (MQ=255)
ACGCTCTCAATAAGTTGCAGGCAGGCGGGTTTTGGT > 1:3165523/1‑36 (MQ=255)
GCTCTCAATAAGTTGCAGGCAGGCGGGTTTTGGTTT > 1:2937989/1‑36 (MQ=255)
CTCTCAATAAGTTGCAGGCAGGCGGTTTTTGGTTTT > 1:3930422/1‑36 (MQ=255)
CTCTCAATAAGTTGCAGGCAGGCGGTTTTTGGTTTT > 1:938316/1‑36 (MQ=255)
AGATGGCGTCGACGCTCTCAATAAGTTGCAGGCAGGCGG.................................. < REL606/1946097‑1946059
..................................GGCGGGTTTTGGTTTTGCACTGCTGGTAGCGTTTGTGGT < REL606/3240660‑3240627
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 6 ≤
ATCG
< 13 ≤
ATCG
< 22 ≤
ATCG
< 37 ≤
ATCG
|