New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 1286705 = | 35 (0.710) | 8 (0.160) | 6/56 | NT | 25.0% | intergenic (+29/‑154) | narI/ECB_01206 | nitrate reductase 1, gamma (cytochrome b(NR)) subunit/hypothetical protein |
? | REL606 | 1802338 = | 13 (0.210) | intergenic (‑136/+67) | ydjR/spy | hypothetical protein/envelope stress induced periplasmic protein |
GACAACTCACCCCGCACCGTGCCCATAAAAAAACCCCGCCGA................................... < REL606/1286746‑1286705
...................................CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAA > REL606/1802338‑1802372
aaAAAAAAACCCCGCCGATCCTGTCCACCGCATTAC < 1:4053813/34‑1 (MQ=17)
AAAAAATCCCCGCCGATCCTGTCCACCGCATTACTG < 1:3613825/36‑1 (MQ=12)
AAAAAACCCCGCCGATCCTGTCCACCGCATTACTGC < 1:6922917/36‑1 (MQ=1)
AAAAAAACCCGCCGATCCTGTCCACCGCATTACTGC < 1:5226555/36‑1 (MQ=0)
AAACCCCCGCCGATCCTGTCCACCGCATTACTGCAA < 1:5839144/36‑1 (MQ=0)
ACCCCGCCGATCCTGTCCACCGCATTACTGCAAGGT < 1:5380101/36‑1 (MQ=1)
CCCCGCCGATCCTGTCCACCGCATTACTGCAAGGTA < 1:3747616/36‑1 (MQ=1)
CCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAG < 1:8307634/36‑1 (MQ=1)
GACAACTCACCCCGCACCGTGCCCATAAAAAAACCCCGCCGA................................... < REL606/1286746‑1286705
...................................CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAA > REL606/1802338‑1802372
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 6 ≤
ATCG
< 21 ≤
ATCG
< 32 ≤
ATCG
< 37 ≤
ATCG
|