Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6062,735,9841.→A 1.9% 2.6 ‑2.5 ‑0.1103coding (135/1425 nt)ascBcryptic 6‑phospho‑beta‑glucosidase
Rejected: Polymorphism prediction not supported by minimum number of reads on both strands.
Reads supporting (aligned to +/- strand):  new base (2/0):  ref base (28/73):  total (30/73)
Fisher's exact test strand distribution p-value = 8.28e-02
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.57e-01

Only 100 of 112 total aligned reads displayed.

GATATGATCCCACATGGCGAGCATCGAATGGCGG.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTGCGCGA  >  REL606/2735949‑2736019
                                     |                                   
gATATGATCCCACATGGCGAGCATCGAATGGCGG.Tg                                      >  1:3828834/1‑36 (MQ=255)
 atatGATCCCACATGGCGAGCATCGAATGGCGG.GG.a                                    >  1:1488747/1‑36 (MQ=255)
   atGATCCCACATGTCGAGCATCTAATGGCGG.TG.aaa                                  <  1:7459171/36‑1 (MQ=38)
   atGATCCCACATGGCGAGCATCGAATGGCGG.TG.aaa                                  <  1:7529662/36‑1 (MQ=255)
   atGATCCCACATGGCGAGCATCGAATGGCGG.TG.aaa                                  <  1:4342085/36‑1 (MQ=255)
    tgctCCCACATGGCGAGCATCGAATGGCGG.TG.AAAc                                 <  1:5170235/33‑1 (MQ=255)
    tGATCCCACATGGCTAGCATCGAATGGCGG.TG.AAAc                                 <  1:6677890/36‑1 (MQ=255)
    tGATCCCACATGGCGATCATCGAATGGCGG.TG.AAAc                                 <  1:1939918/36‑1 (MQ=255)
    tGATCCCACATGGCGAGCATCGAATGGCGG.TG.AAAc                                 <  1:704360/36‑1 (MQ=255)
    tGATCCCACATGGCGAGCATCGAATGGCGG.TG.AAAc                                 <  1:5545467/36‑1 (MQ=255)
     gATCCCACATGGCGAGCATCGAATGGCGG.TG.AAACt                                <  1:499236/36‑1 (MQ=255)
     gATCCCACATGGCGAGCATCGAATGGCGG.TG.AAACt                                <  1:2085895/36‑1 (MQ=255)
     gATCCCACATGGCGAGCATCGAATGGCGG.TG.AAACt                                <  1:6232648/36‑1 (MQ=255)
      aTCCCACATGGCGAGCATCGAATGGCGG.TG.AAACTg                               <  1:1465236/36‑1 (MQ=255)
       tCCCACATGGCGAGCATCGAATGGCGG.TG.AAACTgg                              <  1:5736623/36‑1 (MQ=255)
        cccACATGGCGAGCATCGAATGGCGG.TG.AAACTggg                             <  1:1712621/36‑1 (MQ=255)
         ccACATGGCGAGCATCGAATGGCGG.TG.GAACAgggg                            >  1:1990958/1‑36 (MQ=37)
         ccACATGGCGAGCATCGAATGGCGG.TG.AAACTgggg                            <  1:6618079/36‑1 (MQ=255)
         ccACATGGCGAGCATCGAATGGCGG.TG.AAACTgggg                            <  1:8385067/36‑1 (MQ=255)
         ccACATGGCGAGCATCGAATGGCGG.TG.AAACTgggg                            <  1:8060378/36‑1 (MQ=255)
         ccACATGGCGAGCATCGAATGGCGG.TG.AAACTgggg                            <  1:475378/36‑1 (MQ=255)
         ccACATGGCGAGCATCGAATGGCGG.GG.GAACTgggg                            >  1:1301547/1‑36 (MQ=37)
          cacaTGGCGAGCATCGAATGGCGG.TG.GAACTggggg                           >  1:5406390/1‑35 (MQ=255)
          cacaTGGCGAGCATCGAATGGCGG.TG.AAACTGTGGc                           <  1:7435561/36‑1 (MQ=255)
          cacaTGGCGAGCATCGAATGGCGG.TG.AAACTGGGGc                           <  1:3234420/36‑1 (MQ=255)
          cacaTGGCGAGCATCGAATGGCGG.TG.AAACTGGGGc                           <  1:5256865/36‑1 (MQ=255)
          cacaTGGCGAGCATCGAATGGCGG.TG.AAACTGGGGc                           <  1:5561494/36‑1 (MQ=255)
          cacaTGGCGAGCATCGAATGGCGG.TG.AAAATggggg                           >  1:7551594/1‑35 (MQ=255)
           acaTGGCGAGCATCGAATGGCGG.TG.GAACTgggggt                          >  1:4494146/1‑34 (MQ=37)
           acaTGGCGAGCATCGAATGGCGG.TG.GAACTTGGGCt                          >  1:7490456/1‑36 (MQ=37)
           acaTGGCGAGCATCGAATGGCGG.TG.GAAATgggggg                          >  1:4243182/1‑34 (MQ=37)
           acaTGGCGAGCATCGAATGGCGG.TG.AAACTGGGGCt                          <  1:526716/36‑1 (MQ=255)
           acaTGGCGAGCATCGAATGGCGG.TG.AAACTGGGGCt                          <  1:7478468/36‑1 (MQ=255)
            caTGGCGAGCATCGAATGGCGG.TG.GAAATggggggg                         >  1:8230259/1‑33 (MQ=25)
            caTGGCGAGCATCGAATGGCGG.TG.AAACTGGGGCTg                         <  1:7632797/36‑1 (MQ=255)
            caTGGCGAGCATCGAATGGCGG.TG.AAACTGGGGCTg                         <  1:1036269/36‑1 (MQ=255)
            caTGGCGAGCATAGAATGGCGG.TG.AAACGgggggtt                         >  1:4286928/1‑33 (MQ=25)
             aTGGCGAGCATCGAATGGCGG.TG.AAACTTGGGCttg                        >  1:2519649/1‑34 (MQ=38)
             aTGGCGAGCATCGAATGGCGG.GG.AAACTGGGGCTgg                        >  1:7066191/1‑36 (MQ=255)
              tGGCGAGCATCGAATGGCGG.TG.AAACTTGGGGTggg                       >  1:6340740/1‑35 (MQ=37)
              tGGCGAGCATCGAATGGCGG.TG.AAACTGGGGGTggg                       >  1:4970005/1‑35 (MQ=255)
              tGGCGAGCATCGAATGGCGG.TG.AAACTGGGGCTGGa                       <  1:5992981/36‑1 (MQ=255)
              tGGCGAGCATCGAATGGCGG.TG.AAACTGGGGCTGGa                       <  1:2830970/36‑1 (MQ=255)
              tGGCGAGCATCGAATGGCGG.TG.AAACTGGGGCTGGa                       <  1:4351067/36‑1 (MQ=255)
              tGGCGAGCATCGAATGGCGG.TG.AAACTGGGGCTGGa                       <  1:1200523/36‑1 (MQ=255)
               ggCGAGCATCGAATTGCGG.TG.AAACTGGGGCTGGaa                      <  1:626235/36‑1 (MQ=255)
               ggCGAGCATCGAATGGCGG.TG.GAAATTGGGCGggga                      >  1:3231131/1‑34 (MQ=16)
               ggCGAGCATCGAATGGCGG.TG.AAACTGGGGCTGGaa                      <  1:4264318/36‑1 (MQ=255)
               ggCGAGCATCGAATGGCGG.TG.AAACTGGGGCTGGaa                      <  1:5836506/36‑1 (MQ=255)
               ggCGAGCATCGAATGGCGG.TG.AAACTGGGGCTGGaa                      <  1:5148352/36‑1 (MQ=255)
               ggCGAACATCGAATGGCGG.TG.AAACTGGGGCTGGaa                      <  1:5216009/36‑1 (MQ=255)
                gCGAGCATCGAATGGCGG.TG.AAACTGGGGCTGGaaa                     <  1:231613/36‑1 (MQ=255)
                gCGAGCATCGAATGGCGG.TG.AAACTGGGGCTGGaaa                     <  1:5538425/36‑1 (MQ=255)
                 cGAGCATCGAATGGCGG.TG.AAACTGGGGCTGGaaaa                    <  1:7531947/36‑1 (MQ=255)
                 cGAGCATCGAATGGCGG.TG.AAACTGGGGCTGGaaaa                    <  1:1893677/36‑1 (MQ=255)
                  gAGCATCGAATGGCGG.TG.AAACTGGGGCTGGaaaaa                   <  1:2389999/36‑1 (MQ=255)
                  gAGCATCGAATGGCGG.TG.AAACTGGGGCTGGaaaaa                   <  1:803035/36‑1 (MQ=255)
                   aGCATCGAATGGCGG.TG.AAACTGGGGCTGGAAAAAc                  <  1:5795395/36‑1 (MQ=255)
                   aGCATCGAATGGCGG.TG.AAACTGGGGCTGGAAAAAc                  <  1:6482206/36‑1 (MQ=255)
                   aGCATCGAATGGCGG.TG.AAACTGGGGCTGGAAAAAc                  <  1:3737854/36‑1 (MQ=255)
                   aGCATCGAATGGCGG.GG.AAACTGGGGCTGGGAAAAc                  >  1:5875267/1‑36 (MQ=37)
                   aGCATCGAATGGCGG.CG.GAACTGGGGGTGGaacaaa                  >  1:924790/1‑35 (MQ=16)
                    gCATCGAATGGCGGCGG.AAATTAGGGGTGGgaaaaa                  >  1:5120213/1‑35 (MQ=0)
                    gCATCGAATGGCGG.TG.AAACTGGGGGTGGgaaaaag                 >  1:2459014/1‑34 (MQ=25)
                    gCATCGAATGGCGG.TG.AAACTGGGGCTGGAAAAACg                 <  1:4903341/36‑1 (MQ=255)
                    gCATCGAATGGCGG.TG.AAACTGGGGCTGGAAAAACg                 <  1:4555302/36‑1 (MQ=255)
                     cATCGAATGGCGG.TG.AAACTGGGGCTGGAAAAACGt                <  1:4749623/36‑1 (MQ=255)
                       tctaaTGGCGG.TG.AAACTGGGGCTGGAAAAACGttt              <  1:6748780/33‑1 (MQ=255)
                       tCGAATGGCGG.TG.AAACTGGGTCTGGAAAAACGttt              <  1:1075479/36‑1 (MQ=255)
                       tCGAATGGCGG.TG.AAACTGGGGCTGGAAAAACGttt              <  1:2534714/36‑1 (MQ=255)
                       tCGAATGGCGG.TG.AAACTGGGGCTGGAAAAACGttt              <  1:3120013/36‑1 (MQ=255)
                       tCGAATGGCGG.TG.AAACTGGGGCTGGAAAAACGttt              <  1:1243439/36‑1 (MQ=255)
                        cGAATGGCGG.TG.AAACTGGGGCTGGAAAAACGtttt             <  1:8334566/36‑1 (MQ=255)
                         gAATGGCGG.TG.AAACTGGGGCTGGAAAAACGTTTTc            <  1:7097397/36‑1 (MQ=255)
                           aTGGCGG.TGAAAAATGGGGTGGGAAAAAATtttttg           >  1:3807395/1‑34 (MQ=2)
                           aTGGCGG.TG.GAACTGGGGCTGGAAAAACGTTTTCAg          <  1:3362099/36‑1 (MQ=255)
                           aTGGCGG.TG.AAACAGGGGGTGGGAAAAAGTTTTTAg          >  1:20032/1‑36 (MQ=16)
                            tGGCGG.TG.AAACTGGGGCTGGAAAAACGTTTTCAGt         <  1:2343083/36‑1 (MQ=255)
                              gCGG.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTg       <  1:1882446/36‑1 (MQ=255)
                              gCGG.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTg       >  1:1351041/1‑36 (MQ=255)
                              gCGG.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTg       <  1:4251907/36‑1 (MQ=255)
                              gCGG.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTg       >  1:4657050/1‑36 (MQ=255)
                              gCGG.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTg       <  1:1228703/36‑1 (MQ=255)
                              gCGG.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTg       <  1:3902403/36‑1 (MQ=255)
                               cGG.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTgc      <  1:4339652/36‑1 (MQ=255)
                               cGG.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTgc      <  1:3238496/36‑1 (MQ=255)
                               cGG.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTgc      <  1:6061069/36‑1 (MQ=255)
                                gg.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTgcg     <  1:8451297/36‑1 (MQ=255)
                                gg.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTgcg     >  1:610725/1‑36 (MQ=255)
                                gg.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTgcg     <  1:4470762/36‑1 (MQ=255)
                                gg.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTgcg     <  1:4100827/36‑1 (MQ=255)
                                gg.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTgcg     <  1:2227285/36‑1 (MQ=255)
                                gg.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTgcg     >  1:1025065/1‑36 (MQ=255)
                                 g.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTgcgc    <  1:2813153/36‑1 (MQ=255)
                                 g.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTgcgc    >  1:2712371/1‑36 (MQ=255)
                                   tG.AAACTGGGGCTGGAAAAACGTTTTCAGTTGcgcg   <  1:965159/36‑1 (MQ=255)
                                    g.AAACTGGGGCTGGAAAAACGTTTTCAGTTGCGCGa  <  1:7127807/36‑1 (MQ=255)
                                    g.AAACTGGGGCTGGAAAAACGTTTTCAGTTGCGCGa  >  1:4340649/1‑36 (MQ=255)
                                    g.AAACTGGGGCTGGAAAAACGTTTTCAGTTGCGCGa  >  1:2897027/1‑36 (MQ=255)
                                    g.AAACTGGGGCTGGAAAAACGTTTTCAGTTGCGCGa  >  1:2281042/1‑36 (MQ=255)
                                     |                                   
GATATGATCCCACATGGCGAGCATCGAATGGCGG.TG.AAACTGGGGCTGGAAAAACGTTTTCAGTTGCGCGA  >  REL606/2735949‑2736019

Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 20 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG