New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1 =0 (0.000)34 (0.590) 24/70 NT 100% intergenic (–/‑189) –/thrL –/thr operon leader peptide
?REL606 = 4629812 0 (0.000)intergenic (+24/–) lasT/– predicted rRNA methyltransferase/–

AGACATATTGCCCGTTGCAGTCAGAATGAAAAGCT...................................  <  REL606/35‑1
...................................GAAAAATACTTACTAAGGCGTTTTTTATTTGGTGA  <  REL606/4629812‑4629778
                                                                      
AGACATATTGCCCGTTGCAGTCAGAATGAAAAGCTG                                    <  1:6972290/36‑1 (MQ=1)
 GACATATTGCCCGTTGCAGTCAGAATGAAAAGCTGA                                   <  1:2963194/36‑1 (MQ=1)
  ACATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAA                                  <  1:1228534/36‑1 (MQ=1)
  ACATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAA                                  >  1:5479408/1‑36 (MQ=1)
  ACATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAA                                  <  1:177596/36‑1 (MQ=1)
   CATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAAA                                 <  1:6500881/36‑1 (MQ=1)
   CATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAAA                                 <  1:3600146/36‑1 (MQ=1)
    ATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAAAA                                >  1:7153237/1‑36 (MQ=1)
    ATATTGCCCGTTGCAGTCAGAATGAAAAGCTGAAAA                                <  1:2963037/36‑1 (MQ=1)
      ATTGCCCGTTGCAGTCAGAATGAAAAGCTGAAAAAT                              <  1:6998219/36‑1 (MQ=1)
      ATTGCCCGTTGCAGTCAGAATGAAAAGCTGAAAAAT                              >  1:4678934/1‑36 (MQ=1)
       TTGCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATA                             <  1:4811864/36‑1 (MQ=1)
        TGCCCGTTGCAGTCAGAATGAAAAGCTGAAAAATAC                            <  1:1276004/36‑1 (MQ=1)
        TGCCCGTTGCAGACAGAATGAAAAGCTGAAAAATAC                            <  1:7391071/36‑1 (MQ=0)
          CCCGTTGCAGTCAGAATGAAAAGCTGAAAAATACTT                          >  1:3313097/1‑36 (MQ=35)
          CCCGTTGCAGTCAGAATGAAAAGCTGAAAAATACTT                          >  1:2254619/1‑36 (MQ=35)
          CCCGTTGCAGTCAGAATGAAAAGCTGAAAAATACTT                          <  1:5965440/36‑1 (MQ=35)
            CGTTGCAGTCAGAATGAAAAGCTGAAAAATACTTAC                        <  1:2439730/36‑1 (MQ=40)
            CGTTGCAGTCAGAATGAAAAGCTGAAAAATACTTAC                        >  1:1811331/1‑36 (MQ=40)
            CGTTGCAGTCAGAATGAAAAGCTGAAAAATACTTAC                        >  1:7128349/1‑36 (MQ=40)
            CGTTGCAGTCAGAATGAAAAGCTGAAAAATACTTAC                        >  1:6415144/1‑36 (MQ=40)
             GTTGCAGTCAGAATGAAAAGCTGAAAAATACTTACT                       >  1:637503/1‑36 (MQ=255)
             GTTGCAGTCAGAATGAAAAGCTGAAAAATACTTACT                       >  1:2717294/1‑36 (MQ=255)
                  AGTCAGAATGAAAAGCTGAAAAATACTTACTAAGGC                  <  1:5025414/36‑1 (MQ=255)
                   GTCAGAATGAAAAGCTGAAAAATACTTACTAAGGCG                 >  1:6143669/1‑36 (MQ=255)
                            AAAAGCTGAAAAATACTTACTAAGGCGTTTTTTATT        <  1:6297745/36‑1 (MQ=255)
                            AAAAGCTGAAAAATACTTACTAAGGCGTTTTTTATT        >  1:2981523/1‑36 (MQ=255)
                            AAAAGCTGAAAAATACTTACTAAGGCGTTTTTTATT        >  1:6837154/1‑36 (MQ=255)
                             AAAGCTGAAAAATACTTACTAAGGCGTTTTTTATTT       >  1:967952/1‑36 (MQ=255)
                                 aTGAAAAATACTTACTAAGGCGTTTTTTATTTGGTG   <  1:6505125/35‑1 (MQ=255)
                                 CTGAAAAATACTTACTAAGGCGTTTTTTATTTGGTG   <  1:1360881/36‑1 (MQ=255)
                                  TGAAAAATACTTACTAAGGCGTTTTTTATTTGTTGA  >  1:6493567/1‑36 (MQ=255)
                                  TGAAAAATACTTACTAAGGCGTTTTTTATTTGGTGA  >  1:3909492/1‑36 (MQ=255)
                                  TGAAAAATACTTACTAAGGCGTTTTTTATTTGGTGA  <  1:1022168/36‑1 (MQ=255)
                                                                      
AGACATATTGCCCGTTGCAGTCAGAATGAAAAGCT...................................  <  REL606/35‑1
...................................GAAAAATACTTACTAAGGCGTTTTTTATTTGGTGA  <  REL606/4629812‑4629778

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 26 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG