New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 3814686 | 62 (1.130) | 6 (0.110) | 5/64 | NT | 7.8% | coding (834/1185 nt) | emrD | multidrug efflux system protein |
? | REL606 | = 4414859 | 79 (1.310) | intergenic (+305/‑4) | fklB/cycA | FKBP‑type peptidyl‑prolyl cis‑trans isomerase (rotamase)/D‑alanine/D‑serine/glycine transporter |
CCAATAAACGCTTCTCCACGTTAATGTGGCAGTCGGTT................................... > REL606/3814649‑3814686
...................................GTTTTTTTCTTCCTGTACCTGTCTGTGTTGTTCAGGCT < REL606/4414859‑4414825
AAACGCTTCTCCACGTTAATGTGGCAGTCGGTTTTT > 1:5814247/1‑36 (MQ=255)
AAACGCTTCTCCACGTTAATGTGGCAGTCGGTTTTT > 1:7565209/1‑36 (MQ=255)
ACGCTTCTCCACGTTAATGTGGCAGTCGGTTTTTTT > 1:4693414/1‑36 (MQ=255)
GCTTCTCCACGTTAATGTGGCAGTCGGTTTTCTTCT > 1:4061390/1‑36 (MQ=255)
TCTCCACGTTAATGTGGCAGTCGGTTTTTTTCTTCC > 1:5263847/1‑36 (MQ=255)
CTCCACGTTAATGTGGCAGTCGGTTTTTTTCTTCCT > 1:5000345/1‑36 (MQ=255)
CCAATAAACGCTTCTCCACGTTAATGTGGCAGTCGGTT................................... > REL606/3814649‑3814686
...................................GTTTTTTTCTTCCTGTACCTGTCTGTGTTGTTCAGGCT < REL606/4414859‑4414825
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 6 ≤
ATCG
< 12 ≤
ATCG
< 30 ≤
ATCG
< 37 ≤
ATCG
|