New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1097109 =34 (0.740)5 (0.110) 4/52 NT 12.0% intergenic (+12/‑522) putP/ycdN proline:sodium symporter/putative membrane protein
?REL606 4079105 = 39 (0.630)coding (903/1035 nt) rhaT L‑rhamnose:proton symporter

TAAGGGAGCGCAACCCGCTGCTGAAGCCAAACAAAACCGCCGCA..................................  <  REL606/1097152‑1097109
...................................ACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTG  >  REL606/4079105‑4079138
                                                                              
                           CAAACAAAACCGCCGCACAATACATAGAAACTCATA                 <  1:5423510/36‑1 (MQ=255)
                            cAACAATACCGCCGCACAATACATAGAAACTCATAT                <  1:5706687/35‑1 (MQ=255)
                              ACAAAACCGCCGCACAATACATAGAAACTCATATGC              <  1:3701377/36‑1 (MQ=255)
                                 AAACCGCCGCACAATACATAGAAACTCATATGCAGC           <  1:6755612/36‑1 (MQ=255)
                                  AACCGCCGCACAATACATAGAAACTCATATGCAGCA          <  1:6486042/36‑1 (MQ=255)
                                                                              
TAAGGGAGCGCAACCCGCTGCTGAAGCCAAACAAAACCGCCGCA..................................  <  REL606/1097152‑1097109
...................................ACCGCCGCACAATACATAGAAACTCATATGCAGCATCCAACTG  >  REL606/4079105‑4079138

Base quality scores:  ATCG  < 3 ≤  ATCG  < 6 ≤  ATCG  < 17 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG