New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 110605229 (0.560)4 (0.080) 4/60 NT 9.2% coding (91/2019 nt) ycdR predicted enzyme associated with biofilm formation
?REL606 3572096 = 50 (0.830)coding (545/1470 nt) yhiP predicted transporter

TGCTCGGCGAGTAAAGATTCGCGATCCTGTGGCGGTATAAATGATGTTCTTGACTGGCTAATGCACGCGG  >  REL606/1106018‑1106087
                                  |                                   
tGCTCGGCGAGTAAAGATTCGCGATCCTGTGGCGGt                                    >  1:1794897/1‑36 (MQ=255)
  cTCGGCGAGTAAAGATTCGCGATCCTGTGGCGGtat                                  <  1:5278007/36‑1 (MQ=255)
      gCGAGTAAAGATTCGCGATCCTGTGGCGGggttaat                              >  1:1425360‑M1/1‑29 (MQ=255)
      cctaGTACAGATTCGCGATCCTGTGGCGGTATAAat                              <  1:6622091/33‑1 (MQ=37)
       cGAGTAAAGATTCGCGATCCTGTGGCGGggttaatt                             >  1:6252926‑M1/1‑28 (MQ=255)
       cGAGTAAAGATTCGCGATCCTGTGGCGGTTTTAatt                             >  1:1415138/1‑35 (MQ=37)
        gAGTAAAGATTCGCGATCCTGTGGCGGggttaatta                            >  1:2002086‑M1/1‑27 (MQ=255)
         aGTAAAGATTCGCGATCCTGTGGCGGgtttaattat                           >  1:1284136‑M1/1‑26 (MQ=255)
         aGTAAAGATTCGCGATCCTGTGGCGGTATAAatgat                           <  1:1442991/36‑1 (MQ=255)
         aGTAAAGATTCGCGATCCTGTGGCGGTATAAatgat                           <  1:6218664/36‑1 (MQ=255)
           tAAAGATTCGCGATCCTGTGGCGGGGTAAATGTTGt                         >  1:6899452/1‑36 (MQ=37)
            aaaGATTCGCTATCCTGTGGCGGTATAAATGATGtt                        <  1:3894380/36‑1 (MQ=255)
            aaaGATTCGCGATCCTGTGGCGGTGTAAATTATGtt                        >  1:4795271/1‑36 (MQ=38)
            aaaGATTCGCGATCCTGTGGCGGTATAAATGATGtt                        <  1:6439039/36‑1 (MQ=255)
              aGATTCGCGATCCTGTGGCGGTATAAATGATGTTCt                      <  1:3557116/36‑1 (MQ=255)
                aTTCGCGATCCTGTGGCGGAATATATTAGGTTTTTg                    >  1:2684281/1‑36 (MQ=16)
                  tCGCGATCCTGTGGCGGTATAAATGATGTTCTTGAc                  <  1:100055/36‑1 (MQ=255)
                  tCGCGATCCTGTGGCGGGATAAAATATGTTTttttt                  >  1:3535994/1‑33 (MQ=16)
                   cgcgATCCTGTGGCGGTATAAATGATGTTCTTGACt                 <  1:7491218/36‑1 (MQ=255)
                   cgcgATCCTGTGGCGGTATAAATGATGTTCTTGACt                 <  1:1513759/36‑1 (MQ=255)
                     cgATCCTGTGGCGGTATAAATGATGTTCTTGACTgg               <  1:881124/36‑1 (MQ=255)
                     cgATCCTGTGGCGGTATAAATGATGTTCTTGACTgg               <  1:3459353/36‑1 (MQ=255)
                     cgATCCTGTGGCGGTATAAATGATGTTCTTGACTgg               <  1:6669921/36‑1 (MQ=255)
                     cgATCCTGTGGCGGTATAAATGATGTTCTTGACTgg               <  1:5833001/36‑1 (MQ=255)
                       aTCCTGTGGCGGTATAAATGATGTTCTTGACTGGCt             <  1:3386180/36‑1 (MQ=255)
                        tCCTGTGGCGGTATAAATGATGTTCTTGACTGGCTa            <  1:1633078/36‑1 (MQ=255)
                          cTGTGGCGGTATAAATGATGTTCGTGACTGGCTAAt          <  1:371177/36‑1 (MQ=255)
                           tgtgGCGGTATAAATGATGTTCTTGACTGGCTAATg         <  1:3453435/36‑1 (MQ=255)
                            gtgGCGGTATAAATGATGTTCTTGACTGGCTAATGc        <  1:5386917/36‑1 (MQ=255)
                              ggCGGggttaattatcgcattactggtttacatcgc      >  1:2162531‑M1/1‑5 (MQ=255)
                              ggCGGggttaattatcgcattactggtttacatcgc      <  1:5555276‑M1/36‑32 (MQ=255)
                              ggCGGggttaattatcgcattactggtttacatcgc      >  1:4891430‑M1/1‑5 (MQ=255)
                              ggCGGTATAAATGATGTTCTTGACTGGCTAATGCAc      <  1:2242452/36‑1 (MQ=255)
                               gCGGggttaattatcgcattactggtttacatcgcc     >  1:6628846‑M1/1‑4 (MQ=255)
                               gCGGTATAAATGATGTTCTTGACTGGCTAATGCAcg     <  1:2362973/36‑1 (MQ=255)
                               gCGGTATAAATGATGTTCTTGACTGGCTAATGCAcg     >  1:2857964/1‑36 (MQ=255)
                               gCGGTATAAATGATGTTCTTGACTGGCTAATGCAcg     >  1:7444036/1‑36 (MQ=255)
                               gCGGTATAAATGATGTTCTTGACTGGCTAATGCAcg     <  1:4187735/36‑1 (MQ=255)
                                cGGggttaattatcgcattactggtttacatcgcct    <  1:6374219‑M1/36‑34 (MQ=255)
                                cGGTATAAATGATGTTCTTGACTGGCTAATGCAcgc    <  1:2714990/36‑1 (MQ=255)
                                 ggggttaattatcgcattactggtttacatcgcctg   >  1:5965618‑M1/1‑2 (MQ=255)
                                 ggggttaattatcgcattactggtttacatcgcctg   >  1:600365‑M1/1‑2 (MQ=255)
                                 ggggttaattatcgcattactggtttacatcgcctg   >  1:4219739‑M1/1‑2 (MQ=255)
                                 ggggttaattatcgcattactggtttacatcgcctg   <  1:1417642‑M1/36‑35 (MQ=255)
                                 ggggttaattatcgcattactggtttacatcgcctg   >  1:4065041‑M1/1‑2 (MQ=255)
                                  gggttaattatcgcattactggtttacatcgcctgt  <  1:3464515‑M1/36‑36 (MQ=255)
                                  |                                   
TGCTCGGCGAGTAAAGATTCGCGATCCTGTGGCGGTATAAATGATGTTCTTGACTGGCTAATGCACGCGG  >  REL606/1106018‑1106087

Base quality scores:  ATCG  < 3 ≤  ATCG  < 9 ≤  ATCG  < 23 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG