Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC REL606 3,894,997 Δ6,934 bp 100% IS150‑mediated rbsD[yieO] rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 3894997 3901930 6934 27 [3] [0] 25 rbsD–[yieO] rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 3894996NA (NA)24 (0.580) 18/64 NT 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 3901931 = 0 (0.000)coding (489/1428 nt) yieO predicted multidrug or homocysteine efflux system

GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGACGCCTCCTTTCTTCATAAGGGGGCGTTTTTG  >  REL606/3894963‑3895029
                                 |                                 
gtgtTTAACTGTCCAACTTTTTGGGGTCAGTACAgg                                 <  1:5879808‑M1/36‑3 (MQ=255)
gtgtTTAACTGTCCAACTTTTTGGGGTCAGTACAgg                                 <  1:4794483‑M1/36‑3 (MQ=255)
gtgtTTAACTGTCCAAATTTTTGGGGTCAGTACAgg                                 >  1:799298‑M1/1‑34 (MQ=255)
 tgtTTAACTGTCCAACTTTTTGGGGTCAGTACAggt                                >  1:1301283‑M1/1‑33 (MQ=255)
 tgtTTAACTGTCCAACTTTTTGGGGTCAGTACAggt                                <  1:4719054‑M1/36‑4 (MQ=255)
  gattAACTTTCCACCTTTTTGCGGTCAGTACATACg                               <  1:2614663/34‑1 (MQ=0)
   tttAACTGTCCAACTTTTTGGAGACAGTACATACGc                              >  1:5679536/1‑36 (MQ=11)
   tttAACTGTCCAACTTTTGGCGTTCAGTACATACGc                              >  1:676134/1‑36 (MQ=2)
      aaCTGTCCAACTTTTTGGGGTCAGTACAggttgccc                           <  1:5749452‑M1/36‑9 (MQ=255)
       aCTGTCCAACTTTTTGGGGTCAGTACAggttgccca                          <  1:2740182‑M1/36‑10 (MQ=255)
       aCTATCCAACTTTTTGGGGTCAGTACAggttgccca                          <  1:1225791‑M1/36‑10 (MQ=255)
          gTCCAACTTTTTGGGGTCAGTACAggttgcccacgt                       >  1:1018221‑M1/1‑24 (MQ=255)
           tCCAACTTTTTGGGGTCAGTACAggttgcccaggtg                      <  1:3653140‑M1/36‑14 (MQ=255)
             cAACTTTTTGGGGTCAGTACAggttgcccaggtgac                    <  1:291042‑M1/36‑16 (MQ=255)
              aaCTTTTTGGGGTCAGTACAggttgcccaggtgacc                   >  1:4248546‑M1/1‑20 (MQ=255)
               aCTTTTTGGGGTCAGTACAggttgcccaggtgacca                  <  1:3644452‑M1/36‑18 (MQ=255)
                  ctttgGGGTCAGTACAggttgcccaggtgaccagca               <  1:1341685‑M1/35‑21 (MQ=255)
                   tttGGGGTCAGTACAggttgcccaggtgaccagcac              <  1:5647713‑M1/36‑22 (MQ=255)
                   tttGGGGTCAGTACAggttgcccaggtgaccagcac              <  1:217109‑M1/36‑22 (MQ=255)
                   tttGGGGTCAGTACAggttgcccaggtgaccagcac              <  1:5813060‑M1/36‑22 (MQ=255)
                      ggggTCAGTACAggttgcccaggtgaccagcacgcc           <  1:3281647‑M1/36‑25 (MQ=255)
                      ggggTCAGTACAggttgcccaggtgaccagcacgcc           <  1:132874‑M1/36‑25 (MQ=255)
                          tCAGTACAggttgcccaggtgaccagcacgccgcca       <  1:4898020‑M1/36‑29 (MQ=255)
                           cAGTACAggttgcccaggtgaccagcacgccgccaa      <  1:3281474‑M1/36‑30 (MQ=255)
                            aGTACAggttgcccaggcgaccagcacgccgccaag     >  1:4823841‑M1/1‑6 (MQ=255)
                             gTACAggttgcccaggtgaccagcacgccgccaaga    <  1:5573964‑M1/36‑32 (MQ=255)
                               aCAggttgcccaggtgaccagcacgccgccaagcac  <  1:3020632‑M1/36‑34 (MQ=255)
                                 |                                 
GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGACGCCTCCTTTCTTCATAAGGGGGCGTTTTTG  >  REL606/3894963‑3895029

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 17 ≤  ATCG  < 28 ≤  ATCG  < 37 ≤  ATCG