New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 420234937 (0.630)38 (0.640) 29/68 NT 51.7% coding (211/825 nt) iclR DNA‑binding transcriptional repressor
?REL606 4202661 = 34 (0.560)intergenic (‑102/‑98) iclR/metH DNA‑binding transcriptional repressor/B12‑dependent methionine synthase

CCAATGTCCCAGTTCGCCGACCTGACGCACGAAACC...................................  >  REL606/4202314‑4202349
...................................CTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGC  >  REL606/4202661‑4202695
                                                                       
  AATGTCCCAGTTCGCCGACCTGACGCACGAAACCTC                                   >  1:5496005/1‑36 (MQ=255)
   ATGTCCCAGTTCGCCGACCTGACGCACGAAACCTCA                                  >  1:5238930/1‑36 (MQ=255)
   ATGTCCCAGTTCGCCGACCTGACGCACGAAACCTCA                                  <  1:3938582/36‑1 (MQ=255)
    TGTCCCAGTTCGCCGACCTGACGCACGAACCCTCAT                                 <  1:3591113/36‑1 (MQ=255)
    TGTCCCAGTTCGCCGACCTGACGCACGAAACCTCAT                                 <  1:4420897/36‑1 (MQ=255)
     GTCCCAGTTCGCCGACCTGACTCACGAAACCTCATG                                <  1:5222481/36‑1 (MQ=255)
     GTCCCAGTTCGCCGACCTGACGCACGAAACCTCATG                                >  1:4601646/1‑36 (MQ=255)
      aCCCAGTTCGCCGACCTGACGCACGAAACCTCATGT                               <  1:5892133/35‑1 (MQ=255)
      TCCCAGTTCGCCGACCTGACGCACGAAACCTCATGT                               <  1:523832/36‑1 (MQ=255)
      TCCCAGTTCGCCGACCTGACGCACGAAACCTCATGT                               >  1:6832570/1‑36 (MQ=255)
       CCCAGTTCGCCGGCCTGACGCACGAAACCTCATGTT                              <  1:5403276/36‑1 (MQ=255)
         CAGTTCGCCGACCTGACGCACGAAACCTCATGTTGC                            <  1:7732369/36‑1 (MQ=255)
           GTTCGCCGACCTGACGCACGAAACCTCATGTTGCGT                          <  1:3337716/36‑1 (MQ=255)
            TTCGCCGACCTGACGCACGAAACCTCATGTTGCGTG                         <  1:4219580/36‑1 (MQ=255)
            TTCGCCGACCTGACGCACGAAACCTCATGTTGCGTG                         <  1:2291203/36‑1 (MQ=255)
              CGCCGACCTGACGCACGAACCCTCATGTTGCGTGGT                       <  1:5969308/36‑1 (MQ=255)
               GCCGACCTGACGCACGAAACCTCATGTTGCGTGGTG                      <  1:6280743/36‑1 (MQ=255)
                 CGACCTGACGCACGAAACCTCATGTTGCGTGGTGGT                    <  1:7258016/36‑1 (MQ=255)
                 CGACCTGACGCACGAAACCTCATGTTGCGTGGTGGT                    <  1:7018487/36‑1 (MQ=255)
                  GACCTGACGCACGAAACCTCATGTTGCGTGGTGGTC                   >  1:4863916/1‑36 (MQ=255)
                     CTGACGCACGAAACCTCATGTTGCGTGGTGGTCGCT                <  1:6787823/36‑1 (MQ=255)
                     CTGACGCACGAAACCTCATGTTGCGTGGTGGTCGCT                >  1:6361430/1‑36 (MQ=255)
                     CTGACGCACGAAACCTCATGTTGCGTGGTGGTCGCT                >  1:7319751/1‑36 (MQ=255)
                      TGACGCACTAAACCTCATGTTGCGTGGTGGTCGCTT               <  1:4749353/36‑1 (MQ=255)
                      TGACGCACGAAACCTCATGTTGCGTGGTGGTCGCTT               <  1:3341701/36‑1 (MQ=255)
                      TGACGCACGAAACCTCATGTTGCGTGGTGGTCGCTT               <  1:2707451/36‑1 (MQ=255)
                       GACGCACGAAACCTCATGTTGCGTGGTGGTCGCTTT              >  1:3371640/1‑36 (MQ=255)
                       GACGCACGAAACCTCATGTTGCGTGGTGGTCGCTTT              <  1:1545676/36‑1 (MQ=255)
                        ACGCACGAAACCTCATGTTGCGTGGTGGTCGCTTTT             <  1:5732715/36‑1 (MQ=255)
                          GCACGAAACCTCATGTTGCGTGGTGGTCGCTTTTAC           <  1:5501705/36‑1 (MQ=255)
                          GCACGAAACCTCATGTTGCGTGGTGGTCGCTTTTAC           >  1:3450944/1‑36 (MQ=255)
                          GCACGAAACCTCATGTTGCGTGGTGGTCGCTTTTAC           <  1:1294843/36‑1 (MQ=255)
                            gCGAAACCTCATGTTGCGTGGTGGTCGCTTTTTCCA         <  1:4977113/35‑1 (MQ=255)
                             CGAAACCTCATGTTGCGTGGTGGTCGCTTTTACCAC        <  1:6565782/36‑1 (MQ=255)
                                AACCTCATGTTGCGTGGTGGTCGCTTTTACCACAGA     >  1:1910669/1‑36 (MQ=255)
                                 ACCTCATGTTGCGTGGTGGTCGCTTTTACCACAGAT    <  1:4829025/36‑1 (MQ=255)
                                 ACCTCATGTTGCGTGGTGGTCGCTTTTACCACAGAT    >  1:4016585/1‑36 (MQ=255)
                                  CCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATG   <  1:3399137/36‑1 (MQ=255)
                                                                       
CCAATGTCCCAGTTCGCCGACCTGACGCACGAAACC...................................  >  REL606/4202314‑4202349
...................................CTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGC  >  REL606/4202661‑4202695

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 26 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG