New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 3893549 =NA (NA)3 (0.060) 3/60 NT NA intergenic (+4/‑52) kup/insJ‑5 potassium transporter/IS150 hypothetical protein
?REL606 = 3894994 NA (NA)noncoding (1441/1443 nt) IS150 repeat region

TTATCGAACTGGGTACTCAGGTCGAAATCTAACGCC..A..GACTGTACTGCACCCATTTTGTTGGACGATGAAA  >  REL606/3893514‑3893584
                                   |                                       
ttATCGAACTGGGTACTCAGGTCGAAATCTAACGcc                                         <  1:7850046/36‑1 (MQ=255)
ttATCGAACTGGGTACTCAGGTCGAAATCTAACGcc                                         <  1:1179484/36‑1 (MQ=255)
ttATCGAACTGGGTACTCAGGTCGAAATCTAACGcc                                         <  1:5291632/36‑1 (MQ=255)
 tATCGAACTGGGTACTCAGGTCGAAATCTAACGCC..a                                      >  1:5228505/1‑36 (MQ=255)
 tATCGAACTGGGTACTCAGGTCGAAATCTAACGCC..a                                      <  1:8296114/36‑1 (MQ=255)
  aTCGAACTGGGTACTCAGGTCGAAATCTAACGCC..A..g                                   >  1:8070720/1‑36 (MQ=255)
   tCGAACTGGGTACTCAGGTCGAAATCTAACGCC..A..Ga                                  >  1:2632029/1‑36 (MQ=255)
    tgtttaactgtccacctttttggggtcagtaC..A..GAc                                 >  1:5633225‑M1/32‑36 (MQ=255)
    tgtttaactgtccaactttttggggtcagtaC..A..GAc                                 >  1:268887‑M1/32‑36 (MQ=255)
    cGAACTGGGTACTCAGGTCGAAATCTAACGCC..A..GAc                                 <  1:515615/36‑1 (MQ=255)
    cGAACTGGGTACTCAGGTCGAAATCTAACGCC..A..GAc                                 <  1:4513083/36‑1 (MQ=255)
     gtttaactgtccaactttttggggtcagtaC..A..GACt                                <  1:5109585‑M1/6‑1 (MQ=255)
     gAACTGGGTACTCAGGTCGAAATCTAACGCC..A..GACt                                >  1:4248728/1‑36 (MQ=255)
     gAACTGGGTACTCAGGTCGAAATCTAACGCC..A..GACt                                >  1:6077975/1‑36 (MQ=255)
       aCTGGGTACTCAGGTCGAAATCTAACGCC..A..GACTGt                              >  1:2176603/1‑36 (MQ=255)
       aCTGGGTACTCAGGTCGAAATCTAACGCC..A..GACTGt                              <  1:2776400/36‑1 (MQ=255)
       aCTGGGTACTCAGGTCGAAATCTAACGCC..A..GACTGt                              <  1:7813515/36‑1 (MQ=255)
       aCTGGGTACTCAGGTCGAAATCTAACACC..A..GACTGt                              <  1:2524519/36‑1 (MQ=255)
        cTGGGTACTCAGGTCGAAATCTAACGCC..A..GACTGTa                             >  1:4729795/1‑36 (MQ=255)
         tGGGTACTCAGGTCGAAATCTAACGCC..A..GACTGTAc                            <  1:5377606/36‑1 (MQ=255)
          gggTACTCAGGTCGAAATCTAACGCC..A..GACTGTACt                           <  1:991601/36‑1 (MQ=255)
           ggTACTCAGGTCGAAATCTAACGCC..A..GACTGTACTg                          <  1:2925741/36‑1 (MQ=255)
            gTACTCAGGTCGAAATCTAACGCC..A..GACTGTACTGc                         >  1:1858315/1‑36 (MQ=255)
             tACTCAGGTCGAAATCTAACGCC..AG.GACTGTACTGc                         <  1:5999114/36‑1 (MQ=37)
             tACTCAGGTCGAAATCTAACGCC..A..GACTGTACTGCa                        <  1:7968813/36‑1 (MQ=255)
             tACTCAGGTAGAAATCTATCGCA..A..GACTGTACTGCa                        >  1:1452899/1‑36 (MQ=25)
              aCTCAGGTCGAAATCTAACGCC..AGGGACTGTACTGc                         <  1:1355945/36‑1 (MQ=25)
              aCTCAGGTCGAAATCTAACGCC..A..GACTGTACTGCAc                       <  1:7519249/36‑1 (MQ=255)
              aCTCAGGTCGAAATCTAACGCC..A..GACTGTACTGCAc                       <  1:6850951/36‑1 (MQ=255)
                caactttttggggtcagtaC..A..GACTGTACTGCAccc                     >  1:7595546‑M1/20‑36 (MQ=255)
                 cAGGTCGAAATCTAACGCC..A..GACTGTACTGCACCCa                    <  1:4292360/36‑1 (MQ=255)
                  aGGTCGAAATCTAACGCC..A..GACTGTACTGCACCCAt                   >  1:7994305/1‑36 (MQ=255)
                  aGGCCGAAATCTAACGCC..A..GACTGTACTGCACCCAt                   <  1:3467933/36‑1 (MQ=255)
                    gTCGAAATCTAACGCC..A..GACTGTACTGCACCCAttt                 >  1:1596533/1‑36 (MQ=255)
                    gTCGAAATCAAACGCC..A..GACTGTACTGCACCCAttt                 <  1:2349551/36‑1 (MQ=255)
                     tCGAAATCTAACGCC..A..GACTGTACTGCCCCCAtttt                <  1:13831/36‑1 (MQ=255)
                      cGAAATCTAACGCC..A..GACTGTACTGCACCCATTttg               <  1:5766651/36‑1 (MQ=255)
                       gAAATCTAACGCC..A..GACTGTACTGCACCCATTttgt              <  1:5788687/36‑1 (MQ=255)
                        aaaTCTAACGCC..A..GACTGTACTGCACCCATTttgtt             <  1:8398735/36‑1 (MQ=255)
                        aaaTCTAACGCC..A..GACTGTACTGCACCCATTttgtt             >  1:2436293/1‑36 (MQ=255)
                         aaTCTAACGCCAGA..GACTGTACTGCACCCATTttgt              <  1:6215601/36‑1 (MQ=17)
                          gggtcagtaC..A..GACTGTACTGCACCCATTTTGTTgg           <  1:2817926‑M1/27‑1 (MQ=255)
                          aTCTAACGCC..A..GACTGTACTGCACCCATTTTGTTgg           <  1:232999/36‑1 (MQ=255)
                          aTCTAACGCC..A..GACTGTACTGCACCCATTTTGTTgg           >  1:4831787/1‑36 (MQ=255)
                          aTCTAACGCC..A..GACTGTACTGCACCCATTTTGTTgg           >  1:667134/1‑36 (MQ=255)
                           tCTAACGCC..A..GACTGTACTGCACCCATTTTGTTGGa          >  1:6850058/1‑36 (MQ=255)
                           tCTAACGCC..A..GACTGTACTGCACCCATTTTGTTGGa          >  1:5388018/1‑36 (MQ=255)
                           tCTAACGCC..A..GACTGTACTGCACCCATTTTGTTGGa          >  1:3107208/1‑36 (MQ=255)
                           tCTAACGCC..A..GACTGTACTGCACCCATTTTGTTGGa          <  1:4853880/36‑1 (MQ=255)
                            cTAATGCC..A..GACTGTACTGCACCCATTTTGTTGGAc         <  1:8263360/36‑1 (MQ=255)
                            cTAACGCC..A..GACTGTACTGCGCCCATTTTGTTGGAc         <  1:356076/36‑1 (MQ=255)
                              aaCGCC..A..GACTGTACTGCACCCATTTTGTTGGACGa       <  1:3519170/36‑1 (MQ=255)
                               aCGCC..A..GACTGTACTGCACCCGCTTTGTTGGACGAt      <  1:8332064/36‑1 (MQ=18)
                               aCGCC..A..GACTGTACTGCACCCATTTTGTTGGACGAt      <  1:1074364/36‑1 (MQ=255)
                                cGCC..AG.GACTGTACTGCACCCATTTTGTTGGACGAt      >  1:3684187/1‑36 (MQ=11)
                                 gCC..A..GACTGTACTGCACCCATTTTGTTGGACGATGa    <  1:7201701/36‑1 (MQ=255)
                                 gCC..A..GACTGTAATGCCCCCATTTTGTTGGACGATGa    <  1:7533339/36‑1 (MQ=17)
                                 ccc..A..GACTGTACTACACCCATTTTGTTGGACGATGa    <  1:7802520/35‑1 (MQ=255)
                                  cc..A..GACTGTACTGCACCCATTTTGTTGGACGATGaa   >  1:3602261/1‑36 (MQ=255)
                                  cc..A..GACTGTACTGCACCCATTTTGTTGGACGATGaa   <  1:4780760/36‑1 (MQ=255)
                                  cc..A..GACTGTACTGCACCCATTTTGTTGGACGATGaa   >  1:5055145/1‑36 (MQ=255)
                                  cc..A..GACTGTACTGCACCCATTTTGTTGGACGATGaa   >  1:3096512/1‑36 (MQ=255)
                                  cc..A..GACTGTACTGCACCCATTTTGTTGGACGATGaa   >  1:5247368/1‑36 (MQ=255)
                                  cc..A..GACTGTACTGCACCCATTTTGTTGGACGATGaa   >  1:1724356/1‑36 (MQ=255)
                                   C..A..GACTGTACTGCACCCATTTTGTTGGACGATGaaa  >  1:2892839‑M1/1‑36 (MQ=255)
                                   C..A..GACTGTACTGCACCCATTTTGTTGGACGATGaaa  >  1:1535233‑M1/1‑36 (MQ=255)
                                   |                                       
TTATCGAACTGGGTACTCAGGTCGAAATCTAACGCC..A..GACTGTACTGCACCCATTTTGTTGGACGATGAAA  >  REL606/3893514‑3893584

Base quality scores:  ATCG  < 3 ≤  ATCG  < 16 ≤  ATCG  < 24 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG