Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC REL606 3,894,997 Δ6,934 bp 100% IS150‑mediated rbsD[yieO] rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 3894997 3901930 6934 27 [3] [0] 25 rbsD–[yieO] rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 3894996NA (NA)24 (0.580) 18/64 NT 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 3901931 = 0 (0.000)coding (489/1428 nt) yieO predicted multidrug or homocysteine efflux system

CTATGGGGATATTGATTAAAAATATCCAGTGCCAGGTTGCCCAGGTGACCAGCACGCCGCCAAGAACGGG  >  REL606/3901897‑3901966
                                  |                                   
gtgtttaactgtccaactttttggggtcagtacagg                                    <  1:5879808‑M2/2‑1 (MQ=255)
gtgtttaactgtccaactttttggggtcagtacagg                                    <  1:4794483‑M2/2‑1 (MQ=255)
gtgtttaactgtccaaatttttggggtcagtacagg                                    >  1:799298‑M2/35‑36 (MQ=255)
 tgtttaactgtccaactttttggggtcagtacaGGt                                   >  1:1301283‑M2/34‑36 (MQ=255)
 tgtttaactgtccaactttttggggtcagtacaGGt                                   <  1:4719054‑M2/3‑1 (MQ=255)
      aactgtccaactttttggggtcagtacaGGTTGccc                              <  1:5749452‑M2/8‑1 (MQ=255)
       actgtccaactttttggggtcagtacaGGTTGCCCa                             <  1:2740182‑M2/9‑1 (MQ=255)
       actatccaactttttggggtcagtacaGGTTGCCCa                             <  1:1225791‑M2/9‑1 (MQ=255)
          gtccaactttttggggtcagtacaGGTTGCCCACGt                          >  1:1018221‑M2/25‑36 (MQ=255)
           tccaactttttggggtcagtacaGGTTGCCCAGGTg                         <  1:3653140‑M2/13‑1 (MQ=255)
             caactttttggggtcagtacaGGTTGCCCAGGTGAc                       <  1:291042‑M2/15‑1 (MQ=255)
              aactttttggggtcagtacaGGTTGCCCAGGTGAcc                      >  1:4248546‑M2/21‑36 (MQ=255)
               actttttggggtcagtacaGGTTGCCCAGGTGACCa                     <  1:3644452‑M2/17‑1 (MQ=255)
                  ctttggggtcagtacaGGTTGCCCAGGTGACCAGCa                  <  1:1341685‑M2/20‑1 (MQ=255)
                   tttggggtcagtacaGGTTGCCCAGGTGACCAGCAc                 <  1:217109‑M2/21‑1 (MQ=255)
                   tttggggtcagtacaGGTTGCCCAGGTGACCAGCAc                 <  1:5647713‑M2/21‑1 (MQ=255)
                   tttggggtcagtacaGGTTGCCCAGGTGACCAGCAc                 <  1:5813060‑M2/21‑1 (MQ=255)
                      ggggtcagtacaGGTTGCCCAGGTGACCAGCAcgcc              <  1:3281647‑M2/24‑1 (MQ=255)
                      ggggtcagtacaGGTTGCCCAGGTGACCAGCAcgcc              <  1:132874‑M2/24‑1 (MQ=255)
                          tcagtacaGGTTGCCCAGGTGACCAGCACGCCGCCa          <  1:4898020‑M2/28‑1 (MQ=255)
                           cagtacaGGTTGCCCAGGTGACCAGCACGCCGCCaa         <  1:3281474‑M2/29‑1 (MQ=255)
                            agtacaGGTTGCCCAGGCGACCAGCACGCCGCCAAg        >  1:4823841‑M2/7‑36 (MQ=255)
                             gtacaGGTTGCCCAGGTGACCAGCACGCCGCCAAGa       <  1:5573964‑M2/31‑1 (MQ=255)
                               acaGGTTGCCCAGGTGACCAGCACGCCGCCAAGCAc     <  1:3020632‑M2/33‑1 (MQ=255)
                                  GGTTGCCCAGGTGACCAGCACGCCGCCAAGAACggg  >  1:1955095‑M2/1‑36 (MQ=255)
                                  |                                   
CTATGGGGATATTGATTAAAAATATCCAGTGCCAGGTTGCCCAGGTGACCAGCACGCCGCCAAGAACGGG  >  REL606/3901897‑3901966

Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 37 ≤  ATCG