New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2039192 =1 (0.020)11 (0.190) 8/64 NT 53.7% coding (503/747 nt) wbbA putative glycosyltransferase WbbA
?REL606 2353393 = 18 (0.290)coding (1551/1833 nt) yfbS predicted transporter

GCCGTCGCGGTATTAGAGATAAATAGCCCAATAACCGCCGACAAGACAAACAAACACCCCAGCATCATATG  >  REL606/2353358‑2353428
                                   |                                   
gccgTCGCGGTATTAGAGATAAATAGCCCAATAAcc                                     >  1:4711146/1‑36 (MQ=255)
 ccgTCGCGGTATTAGAGATAAATAGCCCAATAAccg                                    >  1:7036049/1‑36 (MQ=255)
      gcgGTATTAGAGATAAATAGCCCAATAACCGCCgac                               >  1:3367027/1‑36 (MQ=255)
          tATTAGAGATAAATAGCCCAATAACCGCCgacaaga                           >  1:7694569/1‑36 (MQ=255)
          tATAAGAAAAAAATACCAAAATAACCGCCgacaaga                           <  1:382589/36‑1 (MQ=9)
              agagATAAATAGCCCAATAACCGCCGACAAGacaaa                       >  1:6475377/1‑36 (MQ=255)
              agagATAAATAGCCCAATAACCGCCGACAAGacaaa                       >  1:5520675/1‑36 (MQ=255)
              agagATAAATAGCCCAATAACCGCCGACAAGacaaa                       >  1:5105489/1‑36 (MQ=255)
               gagaTAAATAGCCCAATAACAGCCGACAAGacaaac                      >  1:944488/1‑36 (MQ=255)
                agaTAAATAGCCCAATAACCGCCGACAAGacaaaca                     >  1:5442720/1‑36 (MQ=255)
                 gaTAAATAGCCCAATAACCGCCGACAAGacaaacaa                    >  1:7183512/1‑36 (MQ=255)
                 aaaaaaaaacaaaaaaacCGCCGACAAGacaaacaa                    <  1:4206383‑M2/18‑1 (MQ=255)
                  aaaaaaaacaaaaaaacCGCCGACAAGAcaaacaaa                   <  1:6434146‑M2/19‑1 (MQ=255)
                   tAAATAGCCCAATAACCGCCGACAAGACaaacaaac                  >  1:3003732/1‑36 (MQ=255)
                      aaaacaaaaaagcCGCCGACAAGACAAACAAACAcc               <  1:2210199‑M2/23‑1 (MQ=255)
                       aaacaaaaaaacCGCCGACAAGACAAACAAACAccc              <  1:8432697‑M2/24‑1 (MQ=255)
                        acaaaaaaaacCGCCGACAAGACAAACAAACAcccc             <  1:4737062‑M2/25‑1 (MQ=255)
                        aacaaaaaaacCGCCGACAAGACAAACAAACAcccc             <  1:3877381‑M2/25‑1 (MQ=255)
                         gCCCAATAACCGCCGACAAGACAAACAAACACCCCa            >  1:6006103/1‑36 (MQ=255)
                         gCCCAATAACCGCCGACAAGACAAACAAACACCCCa            >  1:7516756/1‑36 (MQ=255)
                         ccaaaaaaacCGCCGACAAGACAAACAAACACCCCa            <  1:1764978‑M2/26‑1 (MQ=255)
                           ccAATAACCGCCGACAAGACAAACAAACACCCCAGc          >  1:4894302/1‑36 (MQ=255)
                           ccAATAACCGCCGACAAGACAAACAAACACCCCAGc          >  1:1815007/1‑36 (MQ=255)
                           aaaaaaacCGCCGACAAGACAAACAAACACCCCAGc          <  1:1957239‑M2/28‑1 (MQ=255)
                            cAATAACCGCCGACAAGACAAACAAACACCCCAGca         >  1:3772005/1‑36 (MQ=255)
                            aaaaaacCGCCGACAAGACAAACAAACACCCCAGca         <  1:2909036‑M2/29‑1 (MQ=255)
                             aaaaacCGACGACAAGACAAACAAACACCCCAGcat        <  1:6564233‑M2/30‑1 (MQ=255)
                              aaaacCGCCGACAAGACAAACAAACACCCCAGcatc       <  1:1097751‑M2/31‑1 (MQ=255)
                               tAACCGCCGACAAGACAAACAAACACCCCAGcatca      >  1:7223217/1‑36 (MQ=255)
                               tAACCGCCGACAAGACAAACAAACACCCCAGcatca      >  1:3760601/1‑36 (MQ=255)
                                aacCGCCGACAAGACAAACAAACACCCCAGcatcat     <  1:203052‑M2/33‑1 (MQ=255)
                                 acCGCCGACAAGACAAACAAACACCCCagcatcaga    >  1:6464681‑M2/3‑34 (MQ=255)
                                  cCGCCGACAAGACAAACAAACACCCCAGCATCatat   <  1:6187379‑M2/35‑1 (MQ=255)
                                   cgccgACAAGACAAACAAACACCCCAGCATCATAtg  >  1:6871737/1‑36 (MQ=255)
                                   |                                   
GCCGTCGCGGTATTAGAGATAAATAGCCCAATAACCGCCGACAAGACAAACAAACACCCCAGCATCATATG  >  REL606/2353358‑2353428

Base quality scores:  ATCG  < 3 ≤  ATCG  < 9 ≤  ATCG  < 20 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG