New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 3198500 =48 (0.880)10 (0.180) 5/62 NT 23.8% coding (563/990 nt) tdcB threonine dehydratase
?REL606 3424874 = 16 (0.260)intergenic (+92/‑34) nirD/nirC nitrite reductase small subunit/nitrite transporter

GTCGATAACGTGATTGTGCCAATTGGTGGTGGCGGTTT..............  <  REL606/3198537‑3198500
..................................GTTTTATTTTTTGTTTTT  >  REL606/3424874‑3424887
                                                    
   GATAACGTGATTGTGCCAATTGGTGGTGGCGGTTTT               >  1:7849497/1‑36 (MQ=255)
   GATAACGTGATTGTGCCAATTGGTGGTGGCGGATTT               >  1:1777642/1‑36 (MQ=255)
      AACGTGATTGTGCCAATTGGTGGTGGCGGTTTTTTT            >  1:5965446/1‑36 (MQ=255)
       ACGTGATTGTGCCAATTGGTGGTGGCGGTTTTTTTT           >  1:5006785/1‑36 (MQ=255)
       ACGTGATTGTGCCAATTGGTGGTGGCGGGTTTATTT           >  1:5694395/1‑36 (MQ=255)
           GATTGTGCCAATTGGTGGTGGCGGTTTTATTTCTTt       >  1:1019580/1‑35 (MQ=255)
            ATTGTGCCAATTGGTGGTGGCGGTTTTATTTTTTtt      >  1:3975229/1‑34 (MQ=255)
            ATTGTGCCAATTGGTGGTGGCGGTTTTATTTCTTGT      >  1:4145380/1‑36 (MQ=255)
            ATTGTGCCAATTGGTGGTGGCGGTTTAATTTTTTGT      >  1:7820478/1‑36 (MQ=255)
                TGCCAATTGGTGGTGGCGGTTTTATTTTTTGTTTTT  >  1:2665105/1‑36 (MQ=255)
                                                    
GTCGATAACGTGATTGTGCCAATTGGTGGTGGCGGTTT..............  <  REL606/3198537‑3198500
..................................GTTTTATTTTTTGTTTTT  >  REL606/3424874‑3424887

Base quality scores:  ATCG  < 3 ≤  ATCG  < 6 ≤  ATCG  < 14 ≤  ATCG  < 26 ≤  ATCG  < 37 ≤  ATCG