New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1286705 =26 (0.540)8 (0.170) 4/56 NT 27.1% intergenic (+29/‑154) narI/ECB_01206 nitrate reductase 1, gamma (cytochrome b(NR)) subunit/hypothetical protein
?REL606 3092577 = 17 (0.280)coding (756/927 nt) yqhG hypothetical protein

AACTCACCCCGCACCGTGCCCATAAAAAAACCCCGCCGA...................................  <  REL606/1286743‑1286705
................................CCGCCGATTCCGCCCGCATTCATGTTCGTTTTACGCTGACCA  >  REL606/3092577‑3092611
                                                                          
                    cacAAAAAAACCCCGCCGATTCCGCCCGCATTCATG                    <  1:3935195/33‑1 (MQ=255)
                       gAAAAAACCCCGCCGATTCCGCCCGCATTCATGTTC                 <  1:7754492/35‑1 (MQ=255)
                       AAAAAAACCCCGCCGATTCCGCCCGCATTCATGTTC                 <  1:2993200/36‑1 (MQ=255)
                         AAAAACCCCGCCGATTCCGCCCGCATTCATGTTCGT               <  1:1354095/36‑1 (MQ=255)
                         AAAAAACCCGCCGATTCCGCCCGCATTCATGTTCGT               <  1:6360370/36‑1 (MQ=255)
                           AAACCCCGCCGATTCCGCCCGCATTCATGTTCGTTT             <  1:1020722/36‑1 (MQ=255)
                           AAAACCCGCCGATTCCGCCCGCATTCATGTTCGTTT             <  1:153809/36‑1 (MQ=255)
                              CCCCGCCGATTCCGCCCGCATTCATGTTCGTTTTAC          <  1:5302233/36‑1 (MQ=255)
                                                                          
AACTCACCCCGCACCGTGCCCATAAAAAAACCCCGCCGA...................................  <  REL606/1286743‑1286705
................................CCGCCGATTCCGCCCGCATTCATGTTCGTTTTACGCTGACCA  >  REL606/3092577‑3092611

Base quality scores:  ATCG  < 3 ≤  ATCG  < 6 ≤  ATCG  < 15 ≤  ATCG  < 34 ≤  ATCG  < 37 ≤  ATCG