Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6063,554,9810A→G100.0% 0.3 1intergenic (+161/‑85)yrhC/yhhIb4552; predicted protein fragment/predicted transposase
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (1/0):  ref base (0/0):  total (1/0)

TTTTGCACTAAATAATTCGCATTTTATGTTTAAAAATTG  >  REL606/3554948‑3554986
                                 |     
ttttGCACTAAATAATTCGCATTTTATGTTTaaaaa     <  1:1030342/36‑1 (MQ=38)
ttttGCACTAAATAATTCGCATTTTATGTTTaaaaa     <  1:8204781/36‑1 (MQ=38)
   tGCACTAAATAATTCGCATTTTATGTTTAAGAATTg  >  1:8039631/1‑36 (MQ=255)
                                 |     
TTTTGCACTAAATAATTCGCATTTTATGTTTAAAAATTG  >  REL606/3554948‑3554986

Base quality scores:  ATCG  < 3 ≤  ATCG  < 16 ≤  ATCG  < 22 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG