Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
MC JC | REL606 | 547,700 | Δ8,224 bp | 100% | IS1‑mediated | [nmpC]–[ECB_00513] | [nmpC], ybcR, ybcS, ybcT, ybcU, ECB_00510, nohB, ECB_00512, [ECB_00513] |
Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | REL606 | 546958–547700 | 555923–555877 | 8178–8966 | 17 [14] | [0] 105 | [insB‑6]–[ECB_00513] | [insB‑6], insA‑6, nmpC, ybcR, ybcS, ybcT, ybcU, ECB_00510, nohB, ECB_00512, [ECB_00513] |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 555924 = | 0 (0.000) | 60 (1.120) | 39/62 | NT | 100% | coding (1209/2346 nt) | ECB_00513 | conserved hypothetical protein |
? | REL606 | = 2035093 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region |
Only 100 of 105 total aligned reads displayed.
GTTATTAAAATGCCATCCGATAAGGTTGTTAGCTTCAAACGCGCATCAGGTGCAACATACATTAATAAATC > REL606/555889‑555959
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atcatacactaaatcagtaagtttgcagcatcaccc > 1:4348209‑M1/36‑36 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc < 1:4326906‑M1/1‑1 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc > 1:4678366‑M1/36‑36 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc < 1:3506769‑M1/1‑1 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc < 1:3339244‑M1/1‑1 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc > 1:4936450‑M1/36‑36 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc > 1:309262‑M1/36‑36 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc > 1:5007397‑M1/36‑36 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc < 1:5736758‑M1/1‑1 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc > 1:5826734‑M1/36‑36 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc > 1:5989267‑M1/36‑36 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc < 1:2465198‑M1/1‑1 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc > 1:2329219‑M1/36‑36 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc < 1:2141527‑M1/1‑1 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc > 1:620040‑M1/36‑36 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc < 1:1829606‑M1/1‑1 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc < 1:1198988‑M1/1‑1 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc < 1:7787638‑M1/1‑1 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc > 1:6650352‑M1/36‑36 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc < 1:6784865‑M1/1‑1 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc < 1:165733‑M1/1‑1 (MQ=255)
atcatacactaaatcagtaagttggcagcatcaccc > 1:6795313‑M1/36‑36 (MQ=255)
atcatacactaaatcagcaagttggcagcatcaccc < 1:1447895‑M1/1‑1 (MQ=255)
tcatacactaaatcagtaagttggcagcatcaccCa > 1:4199055‑M1/35‑36 (MQ=255)
tcatacactaaatcagtaagttggcagcatcaccCa < 1:3471534‑M1/2‑1 (MQ=255)
tcatacactaaatcagtaagttggcagcatcaccCa < 1:5123027‑M1/2‑1 (MQ=255)
tcatacactaaatcagtaagttggcagcatcaccCa > 1:6097007‑M1/35‑36 (MQ=255)
tcatacactaaatcaggaagttggcagcatcaccCa < 1:7213474‑M1/2‑1 (MQ=255)
catacactaaatcagtaagttggcagcatcaccCaa > 1:5218823‑M1/34‑36 (MQ=255)
catacactaaatcagtaagttggcagcatcaccCaa < 1:2287903‑M1/3‑1 (MQ=255)
catacactaaatcagtaagttggcagcatcaccCaa > 1:7231316‑M1/34‑36 (MQ=255)
catacactaaatcagtaagttggcagcatcaccCaa < 1:6187908‑M1/3‑1 (MQ=255)
atacactaaatcagtaagttggcagcatcacccacg < 1:1507905‑M1/4‑3 (MQ=255)
atacactaaatcagtaagttggcagcatcaccCaaa < 1:2705458‑M1/4‑1 (MQ=255)
atacactaaatcagtaagttggcagcatcaccCaaa > 1:5748810‑M1/33‑36 (MQ=255)
atacactaaatcagtaagttggcagcatcaccCaaa < 1:5748071‑M1/4‑1 (MQ=255)
atacactaaatcagtaagttggcagcatcaccCaaa < 1:7567482‑M1/4‑1 (MQ=255)
tacactaaatcagtaagttggcagcatcaccCAAAc > 1:1071359‑M1/32‑36 (MQ=255)
cactaaatcagtaagttggcagcatcaccCAAAcgc < 1:1974560‑M1/7‑1 (MQ=255)
cactaaatcagtaagttggcagcatcaccCAAAcgc > 1:4766599‑M1/30‑36 (MQ=255)
cactaaatcagtaagttggcagcatcaccCAAAcgc > 1:1301525‑M1/30‑36 (MQ=255)
cactaaatcagtaagttggcagcatcaccCAAAcgc > 1:2566308‑M1/30‑36 (MQ=255)
actaaatcagtaagttggcagcatcaccCAAAcgcg > 1:1801292‑M1/29‑36 (MQ=255)
ctaaatcagtaagttggcagcatcaccCAAACgcgc < 1:6115669‑M1/9‑1 (MQ=255)
ctaaatcagtaagttggcagcatcaccCAAACgcgc < 1:3393072‑M1/9‑1 (MQ=255)
taaatcagtaagttggcagcatcaccCAAACGCGCa < 1:3955454‑M1/10‑1 (MQ=255)
taaatcagtaagttggcagcatcaccCAAACGCGCa < 1:4010806‑M1/10‑1 (MQ=255)
taaatcagtaagttggcagcatcaccCAAACGCGCa > 1:4044959‑M1/27‑36 (MQ=255)
aaatcagtaagttggcagcatcaccCAAACGCGCAt < 1:4400150‑M1/11‑1 (MQ=255)
aatcagtaagttggcagcatcaccCAAACGCGCATc < 1:5472432‑M1/12‑1 (MQ=255)
aatcagtaagttggcagcatcaccCAAACGCGCATc > 1:2077964‑M1/25‑36 (MQ=255)
atcagtaagttggcagcatcaccCAAACGCGCATCa > 1:1321356‑M1/24‑36 (MQ=255)
atcagtaagttggcagcatcaccCAAACGCGCATCa < 1:74091‑M1/13‑1 (MQ=255)
atcagtaagttggcagcatcaccCAAACGCGCATCa < 1:7040273‑M1/13‑1 (MQ=255)
cagtaagttggcagcatcaccCAAACGCGCATCAgg > 1:3892727‑M1/22‑36 (MQ=255)
cagtaagttggcagcatcaccCAAACGCGCATCAgg < 1:3159885‑M1/15‑1 (MQ=255)
agtaagttggcagcatcaccCAAACGCGCATCAGGt > 1:4655251‑M1/21‑36 (MQ=255)
agtaagttggcagcatcaccCAAACGCGCATCAGGt < 1:4906011‑M1/16‑1 (MQ=255)
agtaagttggcagcatcaccCAAACGCGCATCAGGt < 1:2467166‑M1/16‑1 (MQ=255)
gtaagttggcagcatcaccGAAACGCGCATCAGGTg > 1:2759949‑M1/20‑36 (MQ=255)
gtaagttggcagcatcaccCAAACGCGCATCAGGTg < 1:4690790‑M1/17‑1 (MQ=255)
aagttggcagcatcaccCAAACGCGCATCAGGTGCa > 1:6746416‑M1/18‑36 (MQ=255)
agttggcagcatcaccCAAACGCGCATCAGGTGCaa < 1:6783772‑M1/20‑1 (MQ=255)
agttggcagcatcaccCAAACGCGCATCAGGTGCaa < 1:1520159‑M1/20‑1 (MQ=255)
agttggcagcatcaccCAAACGCGCATCAGGTGCaa < 1:1380728‑M1/20‑1 (MQ=255)
agttggcagcatcaccCAAACGCGCATCAGGTGCaa > 1:6426746‑M1/17‑36 (MQ=255)
gttggcagcatcaccCAAACGCGCATCAGGTGCAac > 1:1690125‑M1/16‑36 (MQ=255)
ttggcagcatcaccCAAACGCGCATCAGGTGCAaca < 1:410424‑M1/22‑1 (MQ=255)
tggcagcatcaccCAAACGCGCATCAGGTGCAacat < 1:2907091‑M1/23‑1 (MQ=255)
tggcagcatcaccCAAACGCGCATCAGGTGCAacat < 1:1947148‑M1/23‑1 (MQ=255)
ggcagcatcaccCAAACGCGCATCAGGTGCAccata < 1:5175186‑M1/24‑1 (MQ=255)
ggcagcatcaccCAAACGCGCATCAGGTGCAacata < 1:1690029‑M1/24‑1 (MQ=255)
gcagcatcaccCAAACGCGCATCAGGTGCAacatac > 1:5500129‑M1/12‑36 (MQ=255)
gcagcatcaccCAAACGCGCATCAGGTGCAacatac > 1:6732598‑M1/12‑36 (MQ=255)
gcagcatcaccCAAACGCGCATCAGGTGCAacatac > 1:1372197‑M1/12‑36 (MQ=255)
cagcatcaccCAACCGCGCATCAGGTGCAacataca < 1:5905090‑M1/26‑1 (MQ=255)
cagcatcaccCAAACGCGCATCAGGTGCAacataca > 1:929313‑M1/11‑36 (MQ=255)
agcatcaccCAAACGCGCATCAGGTGCAacatacat < 1:2932644‑M1/27‑1 (MQ=255)
gcatcaccCAAACGCGCATCAGGTGCAACATACAtt < 1:5995560‑M1/28‑1 (MQ=255)
gcatcaccCAAACGCGCATCAGGTGCAACATACAtt > 1:2940324‑M1/9‑36 (MQ=255)
gcatcaccCAAACGCGCATCAGGTGCAACATACAtt < 1:4983379‑M1/28‑1 (MQ=255)
catcaccCAAACGCGCATCAGGTGCAACATACATta > 1:2280401‑M1/8‑36 (MQ=255)
tcaccCAAACGCGCATCAGGTGCAACATACATtaat < 1:7753631‑M1/31‑1 (MQ=255)
tcaccCAAACGCGCATCAGGTGCAACATACATtaat > 1:4750557‑M1/6‑36 (MQ=255)
tcaccCAAACGCGCATCAGGTGCAACATACATtaat < 1:6749529‑M1/31‑1 (MQ=255)
caccCAAACGCGCATCAGGTGCAACATACATtaata > 1:2474774‑M1/5‑36 (MQ=255)
caccCAAACGCGCATCAGGTGCAACATACATtaata < 1:2763463‑M1/32‑1 (MQ=255)
caccCAAACGCGCATCAGGTGCAACATACATtaata > 1:5523639‑M1/5‑36 (MQ=255)
caccCAAACGCGCATCAGGTGCAACATACATtaata < 1:5388516‑M1/32‑1 (MQ=255)
accCAAACGCGCATCAGGTGCAACATACATtaataa < 1:4359470‑M1/33‑1 (MQ=255)
accCAAACGCGCATCAGGTGCAACATACATtaataa > 1:3052510‑M1/4‑36 (MQ=255)
accCAAACGCGCATCAGGTGCAACATACATtaataa > 1:6333627‑M1/4‑36 (MQ=255)
cCAAACGCGCATCAGGTGCAACATACATTAATAAAt > 1:7494102‑M1/2‑36 (MQ=255)
cCAAACGCGCATCAGGTGCAACATACATTAATAAAt > 1:7595119‑M1/2‑36 (MQ=255)
CAAACGCGCATCAGGTGCAACATACATTAATAAATc > 1:4938180‑M1/1‑36 (MQ=255)
CAAACGCGCATCAGGTGCAACATACATTAATAAATc > 1:3679680‑M1/1‑36 (MQ=255)
CAAACGCGCATCAGGTGCAACATACATTAATAAATc > 1:1915230‑M1/1‑36 (MQ=255)
CAAACGCGCATCAGGTGCAACATACATTAATAAATc > 1:1211595‑M1/1‑36 (MQ=255)
CAAACGCGCATCAGGTGCAACATACATTAATAAATc > 1:906027‑M1/1‑36 (MQ=255)
CAAACGCGCATCAGGTGCAACATACATTAATAAATc > 1:6153239‑M1/1‑36 (MQ=255)
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GTTATTAAAATGCCATCCGATAAGGTTGTTAGCTTCAAACGCGCATCAGGTGCAACATACATTAATAAATC > REL606/555889‑555959
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 26 ≤
ATCG
< 32 ≤
ATCG
< 37 ≤
ATCG
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