New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 257451124 (0.520)11 (0.240) 5/54 NT 31.4% intergenic (+353/+465) sseA/sseB 3‑mercaptopyruvate sulfurtransferase/rhodanase‑like enzyme, sulfur transfer from thiosulfate
?REL606 4356096 = 24 (0.400)coding (338/537 nt) blc outer membrane lipoprotein (lipocalin)

ATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCG  >  REL606/4356061‑4356131
                                   |                                   
aTTCCCGATCAAGTGCAATGACGTTATAACCGCCAt                                     >  1:4289892/1‑36 (MQ=255)
 ttCCCGATCAAGTGCAATGACGTTATAACCGCCATa                                    >  1:7768864/1‑36 (MQ=255)
 ttCCCGATCAAGTGCAATGACGTTATAACCGCCATa                                    >  1:5164431/1‑36 (MQ=255)
 ttCCCGATCAAGTGCAATGACGTTATAACCGCCATa                                    >  1:3057694/1‑36 (MQ=255)
  tCCCGATCAAGTGCAATGACGTTATAACCGCCATAg                                   >  1:7145694/1‑36 (MQ=255)
  tCCCGATCAAGTGCAATGACGTTATAACCGCCATAg                                   >  1:4250080/1‑36 (MQ=255)
    ccGATCAAGTGCAATGACGTTATAACCGCCATAGaa                                 >  1:2365638/1‑36 (MQ=255)
     cGATCAAGTGCAATGACGTTATAACCGCCATAGaaa                                >  1:879019/1‑36 (MQ=255)
     cGATCAAGTGCAATGACGTTATAACCGCCATAGaaa                                >  1:5191151/1‑36 (MQ=255)
       aTCAAGTGCAATGACGTTATAACCGCCATAGAAAgg                              >  1:6768450/1‑36 (MQ=255)
        tCAAGTGCAATGACGTTATAACCGCCATAGAAAGGa                             >  1:6821154/1‑36 (MQ=255)
        tCAAGTGCAATGACGTTATAACCGCCATAGAAAGGa                             >  1:5100761/1‑36 (MQ=255)
        tCAAGTGCAATGACGTTATAACCGCCATAGAAAGGa                             >  1:1169495/1‑36 (MQ=255)
         cAAGTGCAATGACGTTATAACCGCCATAGAAAGGAc                            >  1:350121/1‑36 (MQ=255)
         cAAGTGCAATGACGTTATAACCGCCATAGAAAGGAc                            >  1:5754868/1‑36 (MQ=255)
         cAAGTGCAATGACGTTATAACCGCCATAGAAAGGAc                            >  1:4255346/1‑36 (MQ=255)
          aaGTGCAATGACGTTATAACCGCCATAGAAAGGAcc                           >  1:5619683/1‑36 (MQ=255)
          aaGTGCAATGACGTTATAACCGCCATAGAAAGGAcc                           >  1:3330400/1‑36 (MQ=255)
           aGTGCAATGACGTTATAACCGCCATAGAAAGGACCa                          >  1:7024245/1‑36 (MQ=255)
           aGTGCAATGACGTTATAACCGCCATAGAAAGGACCa                          >  1:1433169/1‑36 (MQ=255)
           aGTGCAATGACGTTATAACCGCCATAGAAAGGACCa                          >  1:3715358/1‑36 (MQ=255)
             tGCAATGACGTTATAACCGCCATAGAAAGGACCaaa                        >  1:334978/1‑36 (MQ=255)
              gCAATGACGTTATAACCGCCATAGAAAGGACCAAAg                       >  1:6551531/1‑36 (MQ=255)
              gCAATGACGTTATAACCGCCATAGAAAGGACCAAAg                       >  1:6461164/1‑36 (MQ=255)
               cAATGACGTTATAACCGCCATAGAAAGGACCAAAGa                      >  1:5676637/1‑36 (MQ=255)
                aaTGACGTTATAACCGCCATAGAAAGGACCAAAGaa                     >  1:359852/1‑36 (MQ=255)
                aaTGACGTTATAACCGCCATAGAAAGGACCAAAGaa                     >  1:7578716/1‑36 (MQ=255)
                aaTGACGTTATAACCGCCATAGAAAGGACCAAAGaa                     >  1:3798689/1‑36 (MQ=255)
                   gACGTTATAACCGCCATAGAAAGGACCAAAGAATGa                  >  1:6733526/1‑36 (MQ=255)
                   aaaaaaaaaaccgccaTAGAAAGGACCAAAGAATGa                  <  1:6178424‑M2/20‑1 (MQ=255)
                    acaaaaaaaccgccaTAGAAAGGACCAAAGAATGac                 <  1:4472496‑M2/21‑1 (MQ=255)
                    aCGTTATAACCGCCATAGAAAGGACCAAAGAATGac                 >  1:2297517/1‑36 (MQ=255)
                     cGTTATAACCGCCATAGAAAGGACCAAAGAATGaca                >  1:406341/1‑36 (MQ=255)
                     ataaaaaaccgccaTAGAAAGGACCAAAGAATGaca                <  1:6503580‑M2/22‑1 (MQ=255)
                     aaaaaaaaccgccaTAGAAAGGACCAAAGAATGaca                <  1:5330331‑M2/22‑1 (MQ=255)
                      gTTATAACCGCCATAGAAAGGACCAAAGAATGacac               >  1:6232060/1‑36 (MQ=255)
                      aaaacaaccgccaTAGAAAGGACCAAAGAATGacac               <  1:4552154‑M2/23‑1 (MQ=255)
                       aaaaaaccgccaTAGAAAGGACCAAAGAATGACACt              <  1:6044528‑M2/24‑1 (MQ=255)
                        aaaaaccgccaTAGAAAGGACCAAAGAATGACACtt             <  1:820405‑M2/25‑1 (MQ=255)
                         ataACCGCCATAGAAAGGACCAAAGAATGACACttt            >  1:4878099/1‑36 (MQ=255)
                         aaacccgccaTAGAAAGGACCAAAGAATGACACttt            <  1:4291462‑M2/26‑1 (MQ=255)
                         aaaaccgacaTAGAAAGGACCAAAGAATGACACttt            <  1:5449419‑M2/26‑1 (MQ=255)
                          taACCGCCATAGAAAGGACCAAAGAATGACACTTTc           >  1:6008898/1‑36 (MQ=255)
                          aacccgccaTAGAAAGGACCAAAGAATGACACTTTc           <  1:1222132‑M2/27‑1 (MQ=255)
                          aaaccgccaTAGAAAGGACCAAAGAATGACACTTTc           <  1:3650358‑M2/27‑1 (MQ=255)
                          aaaccgccaTAGAAAGGACCAAAGAATGACACTTTc           <  1:4397841‑M2/27‑1 (MQ=255)
                           aaccgccaTAGAAAGGACCAAAGAATGACACTTTca          >  1:217015‑M2/9‑36 (MQ=255)
                           aaccgccaTAGAAAGGACCAAAGAATGACACTTTca          >  1:5404714‑M2/9‑36 (MQ=255)
                           aaccgccaTAGAAAGGACCAAAGAATGACACTTTca          >  1:7642074‑M2/9‑36 (MQ=255)
                           aaccgccaTAGAAAGGAACAAAGAATGACACTTTca          >  1:580295‑M2/9‑36 (MQ=255)
                            accgccaTAGAAAGGACCAAAGAATGACACTTTcag         >  1:4624905‑M2/8‑36 (MQ=255)
                              cgccaTAGAAAGGACCAAAGAATGACACTTTcagcg       <  1:6759461‑M2/31‑1 (MQ=255)
                              cgccaTAGAAAGGACCAAAGAATGACACTTTcagcg       >  1:6980178‑M2/6‑36 (MQ=255)
                              cgccaTAGAAAGGACCAAAGAATGACACTTTcagcg       >  1:956339‑M2/6‑36 (MQ=255)
                              cgccaTAGAAAGGACCAAAGAATGACACTTTcagcg       >  1:6091859‑M2/6‑36 (MQ=255)
                              cgccaTAGAAAGGACCAAAGAATGACACTTTcagcg       >  1:6011815‑M2/6‑36 (MQ=255)
                               gccaTAGAAAGGACCAAAGAATGACACTTTcagcgc      >  1:991862‑M2/5‑36 (MQ=255)
                               gccaTAGAAAGGACCAAAGAATGACACTTTcagcgc      >  1:2705456‑M2/5‑36 (MQ=255)
                               gccaTAGAAAGGACCAAAGAATGACACTTTcagcgc      <  1:5890457‑M2/32‑1 (MQ=255)
                               gccaTAGAAAGGACCAAAGAATGACACTTTcagcgc      >  1:1232995‑M2/5‑36 (MQ=255)
                               gccaTAGAAAGGACCAAAGAATGACACTTTcagcgc      >  1:2014258‑M2/5‑36 (MQ=255)
                               gccaTAGAAAGGACCAAAGAATGACACTTTcagcgc      >  1:6219532‑M2/5‑36 (MQ=255)
                                ccaTAGAAAGGACCAAAGAATGACACTTTcagcgca     <  1:3670860‑M2/33‑1 (MQ=255)
                                ccaTAGAAAGGACCAAAGAATGACACTTTcagcgca     >  1:2278475‑M2/4‑36 (MQ=255)
                                ccaTAGAAAGGAACAAAGAATGACACTTTcagcgca     <  1:3594568‑M2/33‑1 (MQ=255)
                                 caTAGAAAGGACCAAAGAATGACACTTTcagcgcag    <  1:3522576‑M2/34‑1 (MQ=255)
                                 caTAGAAAGGACCAAAGAATGACACTTTcagcgcag    <  1:350899‑M2/34‑1 (MQ=255)
                                 caTAGAAAGGACCAAAGAATGACACTTTcagcgcag    <  1:4838551‑M2/34‑1 (MQ=255)
                                 caTAGAAAGGACCAAAGAATGACACTTTcagcgcag    >  1:3374399‑M2/3‑36 (MQ=255)
                                   tAGAAAGGCCCAAAGAATGACACTTTcagcgcagcg  <  1:6586044/36‑1 (MQ=255)
                                   tAGAAAGGACCAAAGAATGACACTTTcagcgcagcg  >  1:7710532/1‑36 (MQ=255)
                                   |                                   
ATTCCCGATCAAGTGCAATGACGTTATAACCGCCATAGAAAGGACCAAAGAATGACACTTTCAGCGCAGCG  >  REL606/4356061‑4356131

Base quality scores:  ATCG  < 3 ≤  ATCG  < 13 ≤  ATCG  < 23 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG