New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 161952929 (0.590)6 (0.120) 4/60 NT 20.0% intergenic (‑138/+79) rem/hokD predicted protein/small toxic polypeptide
?REL606 1946064 = 19 (0.330)coding (144/390 nt) cheY chemotaxis regulator transmitting signal to flagellar motor component

GAACTTCAAACGCGTTGAAAATAAAAACAAAAACCCGCC.................................  >  REL606/1619491‑1619529
..................................CCGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATC  >  REL606/1946064‑1946096
                                                                        
                        AAACAAAAACCCGCCTGCCTGCAACTTATTGAGAGC              <  1:5596001/36‑1 (MQ=255)
                         AACAAAAACCCGCCTGCCTGCAACTTATTGAGAGCG             <  1:5703673/36‑1 (MQ=255)
                             AAAAACCGCCTGCCTGCAACTTATTGAGAGCGTCGA         <  1:5952449/36‑1 (MQ=255)
                               AACCCGCCTGCCTGCAACTTATTGAGAGCGTCGACG       <  1:2188979/36‑1 (MQ=255)
                                ACCCGCCTGCCTGCAACTTATTGAGAGCGTCGACGC      <  1:4967839/36‑1 (MQ=255)
                                ACCCGCCTGCCTGCAACTTATTGAGAGCGTCGACGC      <  1:5792264/36‑1 (MQ=255)
                                                                        
GAACTTCAAACGCGTTGAAAATAAAAACAAAAACCCGCC.................................  >  REL606/1619491‑1619529
..................................CCGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATC  >  REL606/1946064‑1946096

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 19 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG