New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 108121731 (0.520)7 (0.120) 6/70 NT 17.9% coding (892/1260 nt) yccE hypothetical protein
?REL606 = 3014302 33 (0.550)coding (883/1137 nt) ECB_02815 Capsule polysaccharide export inner‑membrane protein kpsE

TTTTTTTTAAAAAAC...................................  >  REL606/1081203‑1081217
...............CCACCGCCATACGGTTTAGCTTGTCACCCTGCGGC  <  REL606/3014302‑3014268
                                                  
TTTTTTTTAAAAAACCCACCGCCATACGGTTTAGCT                <  1:2919884/36‑1 (MQ=255)
TTTTTTCTAAAAAACCCACCGCCATACGGTTTAGCT                <  1:4791600/36‑1 (MQ=255)
  TTTTTTAAAAAACCCACCGCCATACGGTTTAGCTTG              <  1:3803923/36‑1 (MQ=255)
     TTTAAAAAATCCACCGCCATACGGTTTAGCTTGTCA           <  1:7451590/36‑1 (MQ=255)
          AAAACCCCCCGCCATACGGTTTAGCTTGTCACCCTG      <  1:2292326/36‑1 (MQ=255)
            AACCCCCCGCCATACGGTTTAGCTTGTCACCCTGCG    <  1:3754823/36‑1 (MQ=255)
              CCCCCCGCCATACGGTTTAGCTTGTCACCCTGCGGC  <  1:7112206/36‑1 (MQ=255)
                                                  
TTTTTTTTAAAAAAC...................................  >  REL606/1081203‑1081217
...............CCACCGCCATACGGTTTAGCTTGTCACCCTGCGGC  <  REL606/3014302‑3014268

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 18 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG