New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 1460974NA (NA)12 (0.200) 7/70 NT NA intergenic (+62/‑37) insB‑12/cybB IS1 protein InsB/cytochrome b561
?REL606 2332094 = NA (NA)intergenic (+34/‑53) yfbM/ECB_02199 hypothetical protein/PROBABLE ISRSO11‑TRANSPOSASE ORFA PROTEIN

TTTGAGAAAAGCCCGTT..................................  >  REL606/1460958‑1460974
.................TGTGAACTGCACCCCAAAAGTTGGACACTCAACG  >  REL606/2332094‑2332127
                                                   
ccgGAGAAAAGCCCGTTTGTGAACTGCACCCCAAAA                 >  1:7455072/4‑36 (MQ=255)
ccgGAGAAAAGCCCGTTTGTGAACTGCACCCCAAAA                 >  1:7928285/4‑36 (MQ=255)
   GAGAAAAGCCCGTTTGTGAACTGCACCCCAAAAGTT              >  1:5179029/1‑36 (MQ=255)
    AGAAAAGCCCGTTTGTGAACTGCACCCCAAAAGTTG             >  1:7568638/1‑36 (MQ=255)
        AAGCCCGTTTGTGAACTGCACCCCAAAAGTTGGACc         >  1:2463988/1‑35 (MQ=255)
        AAGCCCGTTTGTGAACTGCACCCCAAAAGTTGGACA         >  1:2703957/1‑36 (MQ=255)
        AAGCCCGTTTGTGAACTGCACCCCAAAAGTTGGACA         >  1:4491339/1‑36 (MQ=255)
           CCCGTTTGTGAACTGCACCCCAAAAGTTGGACACTC      <  1:6329230/36‑1 (MQ=40)
              GTTTGTGAACTGCACCCCAAAAGTTGGACACTCAAC   >  1:1856683/1‑36 (MQ=32)
              GTTTGTGAACTGCACCCCAAAAGTTGGACACTCAAC   <  1:3167517/36‑1 (MQ=32)
               TTTGTGAACTGCACCCCAAAAGTTGGACACTCAACG  >  1:3947342/1‑36 (MQ=1)
               TTTGTGAACTGCACCCCAAAAGTTGGACACTCAACG  >  1:4117308/1‑36 (MQ=1)
                                                   
TTTGAGAAAAGCCCGTT..................................  >  REL606/1460958‑1460974
.................TGTGAACTGCACCCCAAAAGTTGGACACTCAACG  >  REL606/2332094‑2332127

Base quality scores:  ATCG  < 3 ≤  ATCG  < 14 ≤  ATCG  < 24 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG