New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 320338025 (0.500)6 (0.120) 4/58 NT 16.2% intergenic (+828/+174) yhaC/garK hypothetical protein/glycerate kinase I
?REL606 = 4141016 37 (0.620)coding (89/705 nt) yijC DNA‑binding transcriptional repressor

TTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGG...................................  >  REL606/3203340‑3203380
...................................CGGCGGGTTTTTTCTTTTTGTTGCGCTCTTACGCCCATCAC  <  REL606/4141016‑4140982
                                                                            
      CCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGG                                    >  1:6106475/1‑36 (MQ=255)
       CTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGGT                                   >  1:137695/1‑36 (MQ=255)
        TTACCTGATCCCGCTTGCGCGGGCCATCGGCGGGTT                                  >  1:2608735/1‑36 (MQ=255)
          ACCTGATCCCGCTTGCGCGGGCCATCGGCGGGTTgt                                >  1:3739923/1‑34 (MQ=255)
          ACCTGATCCCGCTTGCGCGGGCCATCGGCGGGTTTg                                >  1:7487252/1‑35 (MQ=255)
                TCCCGCTTGCGCGGGCCATCGGCGGGTTTTTTTTTT                          >  1:3839781/1‑36 (MQ=255)
                                                                            
TTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGG...................................  >  REL606/3203340‑3203380
...................................CGGCGGGTTTTTTCTTTTTGTTGCGCTCTTACGCCCATCAC  <  REL606/4141016‑4140982

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 15 ≤  ATCG  < 25 ≤  ATCG  < 37 ≤  ATCG