Predicted mutation
evidence seq id position mutation freq annotation gene description
RA REL606 3,288,092 G→A 100% R57C (CGT→TGT)  arcB ← hybrid sensory histidine kinase in two‑component regulatory system with ArcA

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL6063,288,0920G→A100.0% 248.2 65169arcBhybrid sensory histidine kinase in two‑component regulatory system with ArcA
Reads supporting (aligned to +/- strand):  new base (48/17):  ref base (0/0):  total (48/17)

ACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGC  >  REL606/3288059‑3288123
                                 |                               
aCGGCGTAATCAGCAAACCAAAGAAGATAGAACAaa                               >  1:446994/1‑36 (MQ=255)
aCGGCGTAATCAGCAAACCAAAGAAGATAGAACAaa                               >  1:2751846/1‑36 (MQ=255)
aCGGCGTAATCAGCAAACCAAAGAAGATAGAACAaa                               >  1:2579486/1‑36 (MQ=255)
aCGGCGTAATCAGCAAACCAAAGAAGATAGAACAaa                               >  1:4997693/1‑36 (MQ=255)
  ggCGTAATCAGCAAACCAAAGAAGATAGAACAAATa                             >  1:1084514/1‑36 (MQ=255)
  ggCGTAATCAGCAAACCAAAGAAGATAGAACAAATa                             >  1:2382819/1‑36 (MQ=255)
     gTAATCAGCAAACCAAAGAAGATAGAACAAATAACa                          >  1:1621515/1‑36 (MQ=255)
     gTAATCAGCAAACCAAAGAAGATAGAACAAATAACa                          >  1:5861494/1‑36 (MQ=255)
       aaTCAGCAAACCAAAGAAGATAGAACAAATAACATc                        >  1:1267811/1‑36 (MQ=255)
       aaTCAGCAAACCAAAGAAGATAGAACAAATAACATc                        <  1:2779605/36‑1 (MQ=255)
       aaTCAGCAAACCAAAGAAGATAGAACAAATAACATc                        >  1:4300333/1‑36 (MQ=255)
       aaTCAGCAAACCAAAGAAGATAGAACAAATAACATc                        <  1:502316/36‑1 (MQ=255)
       aaTCAGCAAACCAAAGAAGATAGAACAAATAACATc                        <  1:4712144/36‑1 (MQ=255)
        aTCAGCAAACCAAAGAAGATAGAACAAATAACATCa                       >  1:436226/1‑36 (MQ=255)
        aTCAGCAAACCAAAGAAGATAGAACAAATAACATCa                       >  1:2445322/1‑36 (MQ=255)
        aTCAGCAAACCAAAGAAGATAGAACAAATAACATCa                       <  1:695015/36‑1 (MQ=255)
        aTCAGCAAACCAAAGAAGATAGAACAAATAACATCa                       >  1:1874462/1‑36 (MQ=255)
        aTCAGCAAACCAAAGAAGATAGAACAAATAACATCa                       <  1:4129378/36‑1 (MQ=255)
         taaGCAAACCAAAGAAGATAGAACAAATAACATCaa                      >  1:256167/3‑36 (MQ=38)
          cAGCAAACCAAAGAAGATAGAACAAATAACATCAAt                     >  1:3405706/1‑36 (MQ=255)
          cAGCAAACCAAAGAAGATAGAACAAATAACATCAAt                     >  1:4623167/1‑36 (MQ=255)
          cAGCAAAACAAAGAAGATAGAACAAATAACATCAAt                     <  1:3946725/36‑1 (MQ=37)
           aGCAAACCAAAGAAGATAGAACAAATAACATCAATg                    >  1:4591622/1‑36 (MQ=255)
           aGCAAACCAAAGAAGATAGAACAAATAACATCAATg                    >  1:3121538/1‑36 (MQ=255)
           aGCAAACCAAAGAAGATAGAACAAATAACATCAATg                    >  1:950787/1‑36 (MQ=255)
             cAAACCAAAGAAGATAGAACAAATAACATCAATGCt                  >  1:4506080/1‑36 (MQ=255)
             cAAACCAAAGAAGATAGAACAAATAACATCAATGCt                  <  1:2087680/36‑1 (MQ=255)
             cAAACCAAAGAAGATAGAACAAATAACATCAATGCt                  >  1:1666523/1‑36 (MQ=255)
              aaaCCAAAGAAGATAGAACAAATAACATCAATGCtt                 >  1:4550407/1‑36 (MQ=255)
              aaaCCAAAGAAGATAGAACAAATAACATCAATGCtt                 >  1:755584/1‑36 (MQ=255)
              aaaCCAAAGAAGATAGAACAAATAACATCAATGCtt                 >  1:1018453/1‑36 (MQ=255)
              aaaCCAAAGAAGATAGAACAAATAACATCAATGCtt                 >  1:234682/1‑36 (MQ=255)
               aaCCAAAGAAGATAGAACAAATAACATCAATGCttt                <  1:3654393/36‑1 (MQ=255)
               aaCCAAAGAAGATAGAACAAATAACATCAATGCttt                >  1:1705904/1‑36 (MQ=255)
               aaCCAAAGAAGATAGAACAAATAACATCAATGCttt                >  1:5503061/1‑36 (MQ=255)
               aaCCAAAGAAGATAGAACAAATAACATCAATGCttt                <  1:4823135/36‑1 (MQ=255)
               aaCCAAAGAAGATAGAACAAATAACATCAATGCttt                >  1:2900074/1‑36 (MQ=255)
               aaCCAAAGAAGATAGAACAAATAACATCAATGCgtt                >  1:3635424/1‑36 (MQ=25)
                aCCAAAGAAGATAGAACAAATAACATCAATGCTTTc               >  1:3112219/1‑36 (MQ=255)
                aCCAAAGAAGATAGAACAAATAACATCAATGCTTTc               >  1:2982592/1‑36 (MQ=255)
                  cAAAGAAGATAGANNAAATAACATCAATGCTTTCGa             >  1:4072654/1‑36 (MQ=37)
                   aaaGAAGATAGAACAAATAACATCAATGCTTTCGAc            <  1:4320622/36‑1 (MQ=255)
                   aaaGAAGATAGAACAAATAACATCAATGCTTTCGAc            >  1:1099057/1‑36 (MQ=255)
                   aaaGAAGATAGAACAAATAACATCAATGCTTTCGAc            >  1:5182961/1‑36 (MQ=255)
                   aaaGAAGATAGAACAAATAACATCAATGCTTTCGAc            <  1:2180403/36‑1 (MQ=255)
                   aaaGAAGATAGAACAAATAACATCAATGCTTTCGAc            >  1:2644369/1‑36 (MQ=255)
                    aagaagATAGAACAAATAACATCAATGCTTTCGAcc           >  1:901687/1‑36 (MQ=255)
                    aagaagATAGAACAAATAACATCAATGCTTTCGAcc           <  1:2822599/36‑1 (MQ=255)
                     agaagaTAGAACAAATAACATCAATGCTTTCGGCCt          <  1:4735597/36‑1 (MQ=37)
                     agaagaTAGAACAAATAACATCAATGCTTTCGACCt          >  1:3624325/1‑36 (MQ=255)
                     agaagaTAGAACAAATAACATCAATGCTTTCGACCt          >  1:2919848/1‑36 (MQ=255)
                      gaagaTAGAACAAATAACATCAATGCTTTCGACCTg         >  1:3354793/1‑36 (MQ=255)
                      gaagaTAGAACAAATAACATCAATGCTTTCGACCTg         >  1:4226579/1‑36 (MQ=255)
                       aagaTAGAACAAATAACATCAATGCTTTCGACCTGa        >  1:3813842/1‑36 (MQ=255)
                       aagaTAGAACAAATAACATCAATGCTTTCGACCTGa        >  1:5907153/1‑36 (MQ=255)
                         gaTAGAACAAATAACATCAATGCTTTCGACCTGAcc      >  1:3743078/1‑36 (MQ=255)
                         gaTAGAACAAATAACATCAATGCTTTCGACCTGAcc      <  1:433490/36‑1 (MQ=255)
                          aTAGAACAAATAACATCAATGCTTTCGACCTGACCa     >  1:2709380/1‑36 (MQ=255)
                          aTAGAACAAATAACATCAATGCTTTCGACCTGACCa     >  1:3094296/1‑36 (MQ=255)
                           tAGAACAAATAACATCAATGCTTTCGACCTGACCAt    <  1:4366529/36‑1 (MQ=255)
                            aGAACAAATAACATCAATGCTTTCGACCTGACCATg   >  1:725512/1‑36 (MQ=255)
                            aGAACAAATAACATCAATGCTTTCGACCTGACAATg   >  1:5754454/1‑36 (MQ=37)
                             gAACAAATAACATCAATGCTTTCGACCTGACCATgc  >  1:5898181/1‑36 (MQ=255)
                             gAACAAATAACATCAATGCTTTCGACCTGACCATgc  <  1:1223770/36‑1 (MQ=255)
                             gAACAAATAACATCAATGCTTTCGACCTGACCATgc  <  1:740030/36‑1 (MQ=255)
                                 |                               
ACGGCGTAATCAGCAAACCAAAGAAGATAGAACGAATAACATCAATGCTTTCGACCTGACCATGC  >  REL606/3288059‑3288123

Base quality scores:  ATCG  < 3 ≤  ATCG  < 16 ≤  ATCG  < 26 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG