Predicted mutation
evidence seq id position mutation freq annotation gene description
RA REL606 161,041 T→G 100% N302H (AAC→CAC)  pcnB ← poly(A) polymerase I

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL606161,0410T→G100.0% 122.9 36904pcnBpoly(A) polymerase I
Reads supporting (aligned to +/- strand):  new base (21/15):  ref base (0/0):  total (21/15)

CCAGAACATGGCGGCAAACAGGAACGCCGGGTTCACGCGCATATCGTTATGGATACGCGTATC  >  REL606/161009‑161071
                                |                              
ccAGAACATGGCGGCAACCAGGAACGCCGGGTGCAc                             <  1:2259164/36‑1 (MQ=37)
  aGAACATGGCGGCAAACAGGAACGCCGGGTGCAcgc                           >  1:82775/1‑36 (MQ=255)
  aGAACATGGCGGCAAACAGGAACGCCGGGTGCAcgc                           <  1:3805802/36‑1 (MQ=255)
  aGAACATGGCGGCAAACAGGAACGCCGGGTGCAcgc                           <  1:834483/36‑1 (MQ=255)
  aGAACATGGCGGCAAAAAGGAACGCCGGGTGTAcgc                           >  1:4360976/1‑36 (MQ=25)
  aGAACAGGGCGATAAACAAGAACGCCGGGTGCAcgc                           <  1:2903415/36‑1 (MQ=9)
   gAACATGGCGGCCAACAGCAACGCCGCGTGCAcgcg                          >  1:5781976/1‑36 (MQ=16)
      cATGGCGGCAAACAGGAACGCCGGGTGCACGCGCat                       >  1:429562/1‑36 (MQ=255)
      cATGGCGGCAAACAGGAACGCCGGGGGCACGCGCat                       >  1:3594574/1‑36 (MQ=37)
       aTGGCGGCAAACAGGAACGCCGGGTGCACGCGCata                      <  1:3343837/36‑1 (MQ=255)
       aTGGCGGCAAACAGGAACGCCGGGTGCACGCGCata                      >  1:5771117/1‑36 (MQ=255)
        tGGCGGCAAACAGGAACGCCGGGTGCACGCGCatat                     >  1:5732928/1‑36 (MQ=255)
         ggctgcAAACAGGAACGCCGGGTGCACGCGCATATc                    <  1:1982824/36‑1 (MQ=38)
         ggcggcAAACAGGAACGCCGGGTGCACGCGCATATc                    <  1:252870/36‑1 (MQ=255)
         ggcggcAAACAGGAACGCCGGGTGCACGCGCATATc                    <  1:5506127/36‑1 (MQ=255)
           cggcAAACAGGAACGCCGGGCGCACGCGCATATCGt                  >  1:3279156/1‑36 (MQ=37)
            ggcAAACAGGAACGCCGGGTGCACGCGCATATCgag                 >  1:2576293/1‑34 (MQ=38)
            ggcAAACAGGAACGCCGGGTGCACGCGCATATCGtt                 <  1:2342094/36‑1 (MQ=255)
              cAAACAGGAACGCCGGGTGCACGCGCATATCGTTAt               >  1:1725595/1‑36 (MQ=255)
              cAAACAGGAACGCCGGGTGCAAGAGCTTATCGttct               >  1:2404647/1‑34 (MQ=16)
               aaaCATGAACGCCGTGTGCACGCGCATATCGTTATg              <  1:2739546/36‑1 (MQ=37)
               aaaCAGGAACGCCGGGTGCACGCGCATATCGTTATg              >  1:332735/1‑36 (MQ=255)
                 aCAGGAACGCCGGGTGCACGCGCATATCGTTATGGa            >  1:5880015/1‑36 (MQ=255)
                 aCAGGAACGCCGGGTGCACGCGCATATCGTTATGGa            >  1:2910555/1‑36 (MQ=255)
                 aCAGGAACGCCGGGTGCACGCGCATATCGTTATGGa            >  1:3813658/1‑36 (MQ=255)
                  cAGGAACGCCGGGTGCACGCGCATATCGTTATGGAt           >  1:3968766/1‑36 (MQ=255)
                   aGGAACGCCGGGTGCACGCGCATATCGTTATGGATa          <  1:4965487/36‑1 (MQ=255)
                   aGGAACGCCGAGTGCACGCGCATATCGTTATGGATa          >  1:2650365/1‑36 (MQ=38)
                    ggAACGCCGGGTGCACGCGCATATCGTTATGGATAc         <  1:282734/36‑1 (MQ=255)
                    ggAACGCCGGGTGCACGCGCATATCGTTATGGATAc         <  1:1767679/36‑1 (MQ=255)
                      aaCGCCGGGTGCACGCGCATATCGTTATGGATAcgc       >  1:5059552/1‑36 (MQ=255)
                       aCGACGGGTGCACGCGCATATCGTTATGGATAcgag      >  1:4824368/1‑34 (MQ=37)
                        cGCCGGGTGCACGCGCGTATCGTTATGGATACGCGt     <  1:5664570/36‑1 (MQ=37)
                         gCCGGGTGCACGCGCATATCGTTATGGATACGCGTa    >  1:1513447/1‑36 (MQ=255)
                          ccGGGTGCACGCGCATATCGTTATGGATACGCGTAt   >  1:1421807/1‑36 (MQ=255)
                           cGGGTGCACGCGCATATCGTTATGGATACGCGTATc  <  1:863601/36‑1 (MQ=255)
                                |                              
CCAGAACATGGCGGCAAACAGGAACGCCGGGTTCACGCGCATATCGTTATGGATACGCGTATC  >  REL606/161009‑161071

Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 16 ≤  ATCG  < 27 ≤  ATCG  < 37 ≤  ATCG