New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 137072339 (0.880)4 (0.090) 3/54 NT 11.9% coding (447/1293 nt) ycjN predicted sugar transporter subunit: periplasmic‑binding component of ABC superfamily
?REL606 = 2574504 20 (0.350)intergenic (+346/+472) sseA/sseB 3‑mercaptopyruvate sulfurtransferase/rhodanase‑like enzyme, sulfur transfer from thiosulfate

ACATGTAAATTCACTTTCCTTTAAAAAACAAAAAACCGCCAAAATCAGGCGGTTTTTTGTTGCTGGTCC  >  REL606/2574471‑2574539
                                 |                                   
aCATGTAAATTCACTTTCCTTTAAAAAACAAAAAAC                                   >  1:1839118‑M1/1‑36 (MQ=255)
 cATGTAAATTCACTTTCCTTTAAAAAACAAAAAACC                                  >  1:2466845‑M1/1‑36 (MQ=255)
 cATGTAAATTCACTTTCCTTTAAAAAACAAAAAACC                                  >  1:6417521‑M1/1‑36 (MQ=255)
 cATGTAAATTCACTTTCATTTAAAAAACAAAAAACC                                  <  1:29167‑M1/36‑1 (MQ=255)
       aaTTCACTTTCCTTTAAAAAACAAAAAACCGCCaaa                            >  1:1686856/1‑36 (MQ=255)
         ttCACTTTCCTTTAAAAAACAAAAAACCGCCAAAAt                          >  1:122810/1‑36 (MQ=255)
          tCACTTTCCTTTAAAAAACAAAAAACCGCCAAAATc                         >  1:7419680/1‑36 (MQ=255)
           cACTTTCCTTTAAAAAACAAAAAACCGCCAAAATCa                        >  1:3027627/1‑36 (MQ=255)
             cTTTCCTTTAAAAAACAAAAAACCGCCAAAATCAgg                      >  1:5308574/1‑36 (MQ=255)
              tttCCTTTAAAAAACAAAAAACCGCCAAAATCAGGc                     >  1:4407696/1‑36 (MQ=255)
                tCCTTTAAAAAACAAAAAACCGCCAAAATCAGGCgg                   >  1:124636/1‑36 (MQ=255)
                   tttAAAAAACAAAAAACCGCCAAAATCAGGCGGttt                >  1:1297190/1‑36 (MQ=255)
                   aaaaaaaaaaaaaaaccCGCCAAAATCAGGCGGttt                <  1:1983213/33‑1 (MQ=25)
                    ttAAAAAACAAAAAACCGCCAAAATCAGGCGGtttt               >  1:7273318/1‑36 (MQ=255)
                     tAAAAAACAAAAAACCGCCAAAATCAGGCGGttttt              >  1:7042608/1‑36 (MQ=255)
                     aaaaaaaaaaaaaaccgccacttaatgccagcaatg              >  1:531457‑M2/2‑13 (MQ=255)
                      agaaaataaaaaccCGCC.GAATTTGGCGGtttttta            <  1:4660203/34‑2 (MQ=17)
                      aaaaaaaaaaaaacCGCCAgcaaaatcaccaatatc             <  1:4110355‑M1/36‑18 (MQ=255)
                      aaaaaaaaaaaaacCGCCAAAATCAGGCGGtttttt             <  1:1250294/36‑1 (MQ=255)
                      aaaaaaaaaaaaacCGCC.GAATGTGGCGGtttttta            <  1:5784263/36‑2 (MQ=17)
                        aaaacaaaaaacCGCCAAAATCAGGCGGtttttttt           >  1:6836717/1‑34 (MQ=255)
                        aaaaaaaaaaaccgccacttaatgccagcaatggat           >  1:416727‑M2/1‑10 (MQ=255)
                        aaaaaaaaaaaccgccacttaatgccagcaatggat           >  1:6371394‑M2/1‑10 (MQ=255)
                        aaaaaaaaaaaccgccaatccaggcgctgacaggaa           >  1:658524‑M2/1‑10 (MQ=255)
                         aaaaaaaaaaccgccacttaatgccagcaatggata          >  1:3225833‑M2/1‑9 (MQ=255)
                         aaaaaaaaaacCGCCAgcaaaatcaccaatatcctg          <  1:4945465‑M1/36‑21 (MQ=255)
                          aacaaaaaaccgccaatccaggcgctgacaggaaca         >  1:5297582‑M2/1‑8 (MQ=255)
                          aacaaaaaaccgccaatccaggcgctgacaggaaca         >  1:2106023‑M2/1‑8 (MQ=255)
                          aacaaaaaacCGCCAAAATCAGGCGGTTTTtttttt         >  1:2502716/1‑35 (MQ=255)
                           aaaaaaaaccgccacttaatgccagcaatggatata        >  1:381474‑M2/3‑7 (MQ=255)
                           aaaaaaaacCGCCAAAATCAGGCGGTTTTTTGTTGc        <  1:3624828/34‑1 (MQ=255)
                            caaaaaaccgccaatccaggcgctgacaggaacacc       >  1:7481674‑M2/1‑6 (MQ=255)
                             aaaaaacCGCCAAATTCGGCGGGTTTTTTTTTTCtt      >  1:3874100/1‑35 (MQ=17)
                              aaacacCGCCAgcaaaatcaccaatatcctggacgg     <  1:3389681‑M1/36‑26 (MQ=255)
                              aaaaaccgccacttaatgccagcaatggatataatc     >  1:5905322‑M2/1‑4 (MQ=255)
                              aaaaacCGCCAAAATCAGGCGGTTTTTTTTTTCTgt     >  1:1254888/1‑35 (MQ=21)
                              aaaaacCGCCAAAATCAGGCGGTTTTTTGTTGCttg     >  1:5338627/1‑34 (MQ=255)
                               aaacccgccacttaatgccagcaatggatataatcc    >  1:1774252‑M2/1‑3 (MQ=255)
                                 aacCGCCAgcaaaatcaccaatatcctggacggcac  <  1:4617993‑M1/36‑29 (MQ=255)
                                 |                                   
ACATGTAAATTCACTTTCCTTTAAAAAACAAAAAACCGCCAAAATCAGGCGGTTTTTTGTTGCTGGTCC  >  REL606/2574471‑2574539

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 19 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG