New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 221188548 (0.960)3 (0.060) 3/58 NT 4.9% coding (714/1692 nt) fruA fused fructose‑specific PTS enzymes: IIBcomponent/IIC components
?REL606 = 2503593 69 (1.150)coding (13/1044 nt) ypfG hypothetical protein

GTCGGCAACAAAGCGAAAAAAAAGAGAAGGAAAATGCGATAGCGCATGGACGGTACGACCCCAGAAGTTC  >  REL606/2503559‑2503628
                                  |                                   
gTCGGCAACAAAGCGAAAAAAAAGAGAAGGAAAATg                                    >  1:3485620/1‑36 (MQ=255)
 tCGGCAACAAAGCGAAAAAAAAGAGAAGGAAAATGc                                   >  1:1166071/1‑36 (MQ=255)
  cGGCAACAAAGCGAAAAAAAAGAGAAGGAAAATGCg                                  >  1:489251/1‑36 (MQ=255)
   ggCAACAAAGCGAAAAAAAAGAGAAGGAAAATGCGa                                 <  1:204592/36‑1 (MQ=255)
    gCAACAAAGCGAAAAAAAAGAGAAGGAAAATGCGAt                                <  1:2071834/36‑1 (MQ=255)
    gCAACAAAGCGAAAAAAAAGAGAAGGAAAATGCGAt                                >  1:5133192/1‑36 (MQ=255)
     caacaaAGCGAAAAAAAAGAGAAGGAAAATGCGATa                               >  1:1254204/1‑36 (MQ=255)
     caacaaAGCGAAAAAAAAGAGAAGGAAAATGCGATa                               <  1:4348755/36‑1 (MQ=255)
      aacaaAGCGAAAAAAAAGAGAAGGAAAATGCGATAg                              >  1:7650192/1‑36 (MQ=255)
       acaaAGCGAAAAAAAAGAGAAGGAAAATGCGATAgc                             <  1:2704960/36‑1 (MQ=255)
        caaAGCGAAAAAAAAGAGAAGGAAAATGCGATAgcg                            >  1:2656912/1‑36 (MQ=255)
        caaAGCGAAAAAAAAGAGAAGGAAAATGCGATAgcg                            >  1:1887051/1‑36 (MQ=255)
        caaAGCGAAAAAAAAGAGAAGGAAAATGCGATAgcg                            >  1:5677245/1‑36 (MQ=255)
         aaaGCGAAAAAAAAGAGAAGGAAAATGCGATAgcgc                           >  1:7817709/1‑36 (MQ=255)
            gagAAAAAAAAGAGAAGGAAAATGCGATAGCGCATg                        <  1:1893835/34‑1 (MQ=255)
            gCGAAAAAAAAGAGAAGGAAAATGCGATAGCGCATg                        >  1:377500/1‑36 (MQ=255)
            gCGAAAAAAAAGAGAAGGAAAATGCGATAGCGCATg                        >  1:1700434/1‑36 (MQ=255)
            gCGAAAAAAAAGAGAAGGAAAATGCGATAGCGCATg                        <  1:3838979/36‑1 (MQ=255)
             cGAAAAAAAAGAGAAGGAAAATGCGATAGCGCATgg                       >  1:2981226/1‑36 (MQ=255)
               aaaaaaaaGAGAAGGAAAATGCGATAGCGCATGGAc                     <  1:835936/36‑1 (MQ=255)
               aaaaaaaaGAGAAGGAAAATGCGATAGCGCATGGAc                     >  1:2297795/1‑36 (MQ=255)
                aaaaaaaGAGAAGGAAAATGCGATAGCGCATGGACg                    >  1:7383/1‑36 (MQ=255)
                aaaaaaaGAGAAGGAAAATGCGATAGCGCATGGACg                    >  1:2610052/1‑36 (MQ=255)
                aaaaaaaGAGAAGGAAAATGCGATAGCGCATGGACg                    <  1:1500800/36‑1 (MQ=255)
                aaaaaaaGAGAAGGAAAATGCGATAGCGCATGGACg                    >  1:1752801/1‑36 (MQ=255)
                 aaaaaaGAGAAGGAAAATGCGATAGCGCATGGACgg                   >  1:2148060/1‑36 (MQ=255)
                 aaaaaaGAGAAGGAAAATGCGATAGCGCATGGACgg                   >  1:3623517/1‑36 (MQ=255)
                  aaaaaGAGAAGGAAAATcagcccgccgatggtcgtt                  >  1:1581165‑M2/1‑17 (MQ=255)
                  aaaaaGAGAAGGAAAATGCGATAGCGCATGGACGGt                  >  1:6041307/1‑36 (MQ=255)
                  aaaaaGAGAAGGAAAATGCGATAGCGCATGGACGGt                  >  1:3248019/1‑36 (MQ=255)
                   aaaaGAGAAGGAAAATGCGATAGCGCATGGACGGTa                 <  1:6668957/36‑1 (MQ=255)
                   aaaaGAGAAGGAAAATGCGATAGCGCATGGACGGTa                 >  1:453849/1‑36 (MQ=255)
                   aaaaGAGAAGAAAAATcagcccgccgatggtcgttg                 >  1:3765399‑M2/1‑16 (MQ=255)
                    aaaGAGAAGGAAAATGCGATAGCGCATGGACGGTAc                <  1:451967/36‑1 (MQ=255)
                    aaaGAGAAGGAAAATGCGATAGCGCATGGACGGTAc                >  1:4447494/1‑36 (MQ=255)
                    aaaGAGAAGGAAAATGCGATAGCGCATGGACGGTAc                >  1:508394/1‑36 (MQ=255)
                    aaaGAGAAGGAAAATGCGATAGCGCATGGACGGTAc                >  1:5120628/1‑36 (MQ=255)
                    aaaGAGAAGGAAAATGCGATAGCGCATGGACGGTAc                >  1:5708514/1‑36 (MQ=255)
                    aaaGAGAAGGAAAATGCGATAGCGCATGGACGGGAc                >  1:3871797/1‑36 (MQ=255)
                    aaaGAGAAGAAAAATcagcccgccgatggtcgttgc                >  1:2706409‑M2/1‑15 (MQ=255)
                     aaGAGAAGGAAAATGCGATAGCGCATGGACGGTACg               >  1:597611/1‑36 (MQ=255)
                     aaGAGAAGGAAAATGCGATAGCGCATGGACGGTACg               >  1:4455299/1‑36 (MQ=255)
                     aaGAGAAGGAAAATGCGATAGCGAATGGACGGTACg               >  1:4130839/1‑36 (MQ=255)
                      agagAAGGAAAATGCGATAGCGCATGGACGGTACGa              <  1:5577055/36‑1 (MQ=255)
                      agagAAGGAAAATGCGATAGCGCATGGACGGTACGa              >  1:3016007/1‑36 (MQ=255)
                      agagAAGGAAAATGCGATAGCGCATGGACGGTACGa              >  1:218956/1‑36 (MQ=255)
                        agaAGGAAAATGCGATAGCGCATGGACGGTACGAcc            >  1:1276972/1‑36 (MQ=255)
                        agaAGGAAAATGCGATAGCGCATGGACGGTACGAcc            >  1:2374915/1‑36 (MQ=255)
                        agaAGGAAAATGCGATAGCGCATGGACGGTACGAcc            >  1:2850706/1‑36 (MQ=255)
                         gaAGGAAAATGCGATAGCGCATGGACGGTACGAccc           >  1:6886387/1‑36 (MQ=255)
                         gaAGGAAAATGCGATAGCGCATGGACGGTACGAccc           >  1:4474949/1‑36 (MQ=255)
                         gaACGAAAATGCGAGAGCGCAGGCACGGTACGAccc           >  1:7819954/1‑36 (MQ=16)
                          aaGGAAAATGCGATAGCGCATTGACGGTACGAcccc          <  1:5986233/36‑1 (MQ=255)
                          aaGGAAAATGCGATAGCGCATGGACGGTACGAcccc          <  1:1304546/36‑1 (MQ=255)
                          aaGGAAAATGCGATAGCGCATGGACGGTACGAcccc          <  1:5971758/36‑1 (MQ=255)
                          aaGGAAAATGCGATAGCGCATGGACGGTACGAccca          >  1:456737/1‑35 (MQ=255)
                          aaGGAAAATGCGATAGCGCATGGACGGTACGAcacc          >  1:3710493/1‑36 (MQ=255)
                           aGGAAAATGCGATAGCGCATGGACGGTACGACCCCa         >  1:1907970/1‑36 (MQ=255)
                           aGGAAAATGCGATAGCGCATGGACGGTACGACCCCa         >  1:1361927/1‑36 (MQ=255)
                            ggAAAATGCGATAGCGCATGGACGGTACGACCCCAg        >  1:3019378/1‑36 (MQ=255)
                            ggAAAATGCGATAGCGCATGGACGGTACGACCCCAg        >  1:7040580/1‑36 (MQ=255)
                             gAAAATGCGATAGCGCATGGACGGTACGACCCCAGa       <  1:6160490/36‑1 (MQ=255)
                              aaaaTGCGATAGCGCATGGACGGTACGACCCCAGaa      >  1:1936283/1‑36 (MQ=255)
                              aaaaTGCGATAGCGCATGGACGGTACGACCCCAGaa      <  1:3828720/36‑1 (MQ=255)
                              aaaaTGCGATAGCGCATGGACGGTACGACCCCAGaa      <  1:4169690/36‑1 (MQ=255)
                              aaaaTGCGATAGCGCATGGACGGTACGACCCCAGaa      <  1:2501867/36‑1 (MQ=255)
                              aaaaTGCGATAGCGCATGGACGGTACGACCCCAGaa      <  1:4932061/36‑1 (MQ=255)
                               aaaTGCGATAGCGCATGGACGGTACGACCCCAGAAg     <  1:6261177/36‑1 (MQ=255)
                                 aTGCGATAGCGCATGGACGGTACGACCCCAGAAGtt   <  1:1278289/36‑1 (MQ=255)
                                 aTGCGATAGCGCATGGACGGTACGACCCCAGAAGtt   >  1:7723528/1‑36 (MQ=255)
                                 aTGCGATAGCGCATGGACGGTACGACCCCAGAAGtt   >  1:1364315/1‑36 (MQ=255)
                                 aTGCGATAGCGCATGGACGGTACGACCCCAGAAGtt   >  1:1668396/1‑36 (MQ=255)
                                  tGCGATAGCGCATGGACGGTACGACCCCAGAAGTTc  <  1:2886750/36‑1 (MQ=255)
                                  |                                   
GTCGGCAACAAAGCGAAAAAAAAGAGAAGGAAAATGCGATAGCGCATGGACGGTACGACCCCAGAAGTTC  >  REL606/2503559‑2503628

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 37 ≤  ATCG