New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1474796 =31 (0.640)9 (0.190) 6/56 NT 27.3% coding (1030/1209 nt) ydcM predicted transposase
?REL606 = 2574503 17 (0.280)intergenic (+345/+473) sseA/sseB 3‑mercaptopyruvate sulfurtransferase/rhodanase‑like enzyme, sulfur transfer from thiosulfate

TAAACATGTAAATTCACTTTCCTTTAAAAAACAAAAAACCGCCAAAATCAGGCGGTTTTTTGTTGCTGGTC  >  REL606/2574468‑2574538
                                   |                                   
tAAACATGTAAATTCACTTTCCTTTaaaaaacaaaa                                     <  1:5357719/36‑1 (MQ=255)
tAAACATGTAAATTCACTTTCCTTTaaaaaacaaaa                                     >  1:4951532/1‑36 (MQ=255)
    cATGTAAATTCACTTTCCTTTAAAAAACAAAAaacc                                 <  1:1566169‑M2/36‑5 (MQ=255)
    cATGTAAATTCACTTTCCTTTAAAAAACAAAAaacc                                 >  1:2554732‑M2/1‑32 (MQ=255)
    cATGTAAATTCACTTTCCTTTAAAAAACAAAAaacc                                 >  1:2870012‑M2/1‑32 (MQ=255)
     aTGTAAATTCACTTTCCTTTAAAAAACAAAAaaccg                                <  1:1055674‑M2/36‑6 (MQ=255)
     aTGTAAATTCACTTTCCTTTAAAAAACAAAAaaccg                                >  1:2131311‑M2/1‑31 (MQ=255)
      tGTAAATTCACTTTCCTTTAAAAAACAAAAaaccgc                               <  1:3382430‑M2/36‑7 (MQ=255)
         aaaTTCACTTTCATTAAAAAAAAAAAAAACCGCCaa                            <  1:6580938/36‑1 (MQ=25)
           aTTCACTTTCCTTTAAAAAACAAAAAACCGGCaaaa                          >  1:3440433/1‑36 (MQ=255)
              cACTTTAATTAAAAAAAAAAAAAACCGCCAAAATCa                       <  1:479189/36‑1 (MQ=19)
                cTTTCCTTTAAAAAACAAAAAACCGCCAAAATCAgg                     >  1:2757873/1‑36 (MQ=255)
                    ccTTTAAAAAACAAAAAACCGCCAAAATCAGGCGGt                 >  1:7007984/1‑36 (MQ=255)
                    ccTTTAAAAAACAAAAAACCGCCAAAATCAGGCGGt                 >  1:2759894/1‑36 (MQ=255)
                       ttAAAAAACAAAAAACCGCCAATATCAGGCGGtttt              >  1:1031008/1‑36 (MQ=255)
                        tAAAAAACAAAAAACCGCCAAAATCAGGCGGttttt             >  1:3529425/1‑36 (MQ=255)
                        tAAAAAACAAAAAACAGCCAAAATCAGGCGGttttt             >  1:1242158/1‑36 (MQ=255)
                        aagaaaaaaaaaaacCGCC.GAATTTGGCGGtttttt            <  1:3410894/33‑1 (MQ=17)
                        aaaaaaaaaaaaaacCGCCAAAATCAGGCGGttttt             <  1:5394496/35‑1 (MQ=255)
                        aaaaaaaaaaaaaacCGCCAAAATCAGGCGGttttt             <  1:4403291/35‑1 (MQ=255)
                         aaaaaacaaaaaacCGCCAAAATCAGGCGGtttttt            >  1:3345861/1‑36 (MQ=255)
                         aaaaaaaaaaaaaccgcctgtcacaaagtaaattca            >  1:5694973‑M2/1‑11 (MQ=255)
                         aaaaaaaaaaaaacCGCCAtagaaaggaccaaagaa            <  1:3458943‑M1/36‑18 (MQ=255)
                         aaaaaaaaaaaaacCGCCAtagaaaggaccaaagaa            <  1:5602230‑M1/36‑18 (MQ=255)
                          aaaaataaaaaaccgcctgcctgcaacttattgaga           >  1:7310442‑M2/1‑10 (MQ=255)
                          aaaaaccaaaaaccgcctgcctgcaacttattgaga           >  1:7834296‑M2/1‑10 (MQ=255)
                          aaaaaaaaaaaacCGCCAtagaaaggaccaaagaat           <  1:4823930‑M1/36‑19 (MQ=255)
                           aaaacaaaaaaccgcctgcctgcaacttattgagag          >  1:6828849‑M2/1‑9 (MQ=255)
                           aaaaaaaaaaaccgcctgtcacaaagtaaattcaga          >  1:937353‑M2/1‑9 (MQ=255)
                            aaaaaaaaaaccgcctgtcacaaagtaaattcagat         >  1:2622782‑M2/1‑8 (MQ=255)
                            aaaaaaaaaacCGCCAAAATCAGGCGGTTTTttgtt         <  1:4068201/36‑1 (MQ=255)
                             gaaaaaaaaccgcctgtcacaaagtaaattcagatg        >  1:7772580‑M2/4‑7 (MQ=255)
                             aaaaaaaaaccgcctgtcacaaagtaaattcagatg        >  1:1717926‑M2/1‑7 (MQ=255)
                             aaaaaaaaacCGCCAATATCAGGCGGTTTTttgttg        <  1:6742092/33‑1 (MQ=25)
                              acaaaaaacCGCCAAAATCAGGCGGTTTTttgtttc       >  1:2231500/1‑34 (MQ=255)
                              aaaaaaaaccgCCAtagaaaggaccaaagaatgaca       <  1:2424060‑M1/34‑23 (MQ=255)
                               aaaaaaaccgcctgtcacaaagtaaattcagatgcc      >  1:4483207‑M2/2‑5 (MQ=255)
                                caacaaccgcctgcctgcaacttattgagagcgtcg     >  1:7475400‑M2/2‑4 (MQ=255)
                                caaaaaccgcctgcctgcaacttattgagagcgtcg     >  1:6513445‑M2/2‑4 (MQ=255)
                                 aacaaccgcctgtcacaaagtaaattcagatgccag    >  1:1734542‑M2/1‑3 (MQ=255)
                                 aaaaaccgcctgtcacaaagtaaattcagatgccag    >  1:4374847‑M2/1‑3 (MQ=255)
                                 aaaaacCGCCAtagaaaggaccaaagaatgacactt    <  1:2627217‑M1/36‑26 (MQ=255)
                                  aaacccgcctgcctgcaacttattgagagcgtcgac   >  1:5471989‑M2/1‑2 (MQ=255)
                                  aaacccgcctgcctgcaacttattgagagcgtcgac   >  1:1453534‑M2/1‑2 (MQ=255)
                                  aaaaccgcctgcctgcaacttattgagagcgtcgac   >  1:832361‑M2/1‑2 (MQ=255)
                                  aaaacCGCCAtagaaaggaccaaagaatgacacttt   <  1:3416513‑M1/36‑27 (MQ=255)
                                   aaaccgcctgtcacaaagtaaattcagatgccaggt  >  1:3841867‑M2/1‑1 (MQ=255)
                                   aaacCGCCAtagaaaggaccaaagaatgacactttc  <  1:379095‑M1/36‑28 (MQ=255)
                                   aaacCGCCAtagaaaggaccaaagaatgacactttc  <  1:995655‑M1/36‑28 (MQ=255)
                                   aaacCGCCAAAATCAGGCGGTTTTTTTTTTCTTGTc  >  1:3011563/1‑36 (MQ=21)
                                   |                                   
TAAACATGTAAATTCACTTTCCTTTAAAAAACAAAAAACCGCCAAAATCAGGCGGTTTTTTGTTGCTGGTC  >  REL606/2574468‑2574538

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 20 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG