New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 370838 = | 31 (0.550) | 4 (0.070) | 3/64 | NT | 11.1% | intergenic (+30/‑89) | phoA/psiF | bacterial alkaline phosphatase/hypothetical protein |
? | REL606 | 3051517 = | 33 (0.530) | coding (835/1224 nt) | glcF | glycolate oxidase iron‑sulfur subunit |
CCATTAAGTCTGGTTGCTAACAGCAAAAAAACCACCCG................................... < REL606/370875‑370838
...................................CCGCCAGTTCACTGACCTGACGCGCTTTATCGGCATAT > REL606/3051517‑3051551
CAAAAAAACCCCCCGCCAGTTCACTGACCTGACGCG < 1:2595051/36‑1 (MQ=255)
AAAAACCACCCGCCAGTTCACTGCCCTGACGCGCTT < 1:660530/36‑1 (MQ=255)
AACCAACCGCCAGTTCACTGACCTGACGCGCTTTAT < 1:8073706/36‑1 (MQ=0)
cccCCCGCCAGTTCACTGACCTGACGCGCTTTATCG < 1:4997079/33‑1 (MQ=12)
CCATTAAGTCTGGTTGCTAACAGCAAAAAAACCACCCG................................... < REL606/370875‑370838
...................................CCGCCAGTTCACTGACCTGACGCGCTTTATCGGCATAT > REL606/3051517‑3051551
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 6 ≤
ATCG
< 11 ≤
ATCG
< 30 ≤
ATCG
< 37 ≤
ATCG
|