Read alignment evidence...
  seq id position change freq score reads annotation genes product
*REL606554,3770T→C100.0% ‑0.1 22537ECB_00512putative tail component of prophage
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (1/0):  ref base (1/0):  total (2/0)

CCGTTTGACCGGCAAATTGTTATTCCGGCGGTGGCATTCAGTGGCGCTAAACATG  >  REL606/554346‑554400
                               |                       
ccGTTTGACCGGCAAATTGTTATTCCGGCGGCggga                     >  1:6668948/1‑34 (MQ=1)
                   ttATTCCGGCGGTGGCCTTCTGTGGGGCTTAAAAtt  >  1:4409291/1‑35 (MQ=0)
                               |                       
CCGTTTGACCGGCAAATTGTTATTCCGGCGGTGGCATTCAGTGGCGCTAAACATG  >  REL606/554346‑554400

Base quality scores:  ATCG  < 3 ≤  ATCG  < 6 ≤  ATCG  < 9 ≤  ATCG  < 19 ≤  ATCG  < 35 ≤  ATCG