New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1292269 | 20 (0.470) | 5 (0.120) | 3/52 | NT | 16.4% | intergenic (+110/+34) | galU/hns | glucose‑1‑phosphate uridylyltransferase/global DNA‑binding transcriptional dual regulator H‑NS |
? | REL606 | = 2173874 | 31 (0.540) | coding (452/1716 nt) | dld | D‑lactate dehydrogenase, FAD‑binding, NADH independent |
TATTAAATTGTCTTAAACCGGACAATAAAAAATCCCGCCGATG................................... > REL606/1292227‑1292269
..................................CCGCCGATGACCGATGCGCCTATACACGATGATCCAATCACTGA < REL606/2173874‑2173840
ATAAAAAAGCCCGCCGATGACCGATGCGCCTATACA < 1:6972855/36‑1 (MQ=255)
AAAAAACCCCGCCGATGACCGATGCGCCTATACACG < 1:3856905/36‑1 (MQ=255)
AAAAACCCCGCCGATGACCGATGCGCCTATACACGA < 1:3039471/36‑1 (MQ=255)
AAAAACCCCGCCGATGACCGATGCGCCTATACACGA < 1:5951049/36‑1 (MQ=255)
aacCCCGCCGATGACCGATGCGCCTATACACGATGA < 1:7127751/33‑1 (MQ=255)
TATTAAATTGTCTTAAACCGGACAATAAAAAATCCCGCCGATG................................... > REL606/1292227‑1292269
..................................CCGCCGATGACCGATGCGCCTATACACGATGATCCAATCACTGA < REL606/2173874‑2173840
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 6 ≤
ATCG
< 16 ≤
ATCG
< 29 ≤
ATCG
< 37 ≤
ATCG
|