New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 640118 =38 (0.690)9 (0.160) 6/62 NT 24.7% intergenic (+36/+19) cspE/ccrB cold shock protein E/camphor resistance protein CrcB
?REL606 = 1245375 17 (0.280)coding (66/441 nt) ycgY hypothetical protein

CGGCCTCAACCGCACACTAAAGACCAAAAAAAAACCCGC...................................  <  REL606/640156‑640118
...................................CCGCCTCACTATCCGCCCCATTTTTAACGCCTGACTGGC  <  REL606/1245375‑1245341
                                                                          
                      ACCACAAAAAAACCCGCCTCACTATCCGCCCCATTT                  <  1:5194725/36‑1 (MQ=255)
                       CCAAACAAAAACCCGCCTCACTATCCGCCCCATTTT                 <  1:5876837/36‑1 (MQ=255)
                        CAAAAAAAAACCCGCCTCACTATCCGCCCCATTTTT                <  1:3297907/36‑1 (MQ=255)
                          AAACAAAACCCGCCTCACTATCCGCCCCATTTTTAA              <  1:2069000/36‑1 (MQ=255)
                          AAAAAAGACCCGCCTCACTATCCGCCCCATTTTTAA              <  1:4520533/36‑1 (MQ=255)
                          AAAAAAAACCCGCCTCACTATCCGCCCCATTTTTAA              <  1:1960249/36‑1 (MQ=255)
                           acAAAAACCCGCCTCACTATCCGCCCCATTTTTAAC             <  1:1513514/34‑1 (MQ=255)
                           AAAAAAACCCGCCTCACTATCCGCCCCATTTTTAAC             <  1:3619495/36‑1 (MQ=255)
                               AAACCCGCCTCACTATCCGCCCCATTTTTAACGCCT         <  1:2524273/36‑1 (MQ=255)
                                                                          
CGGCCTCAACCGCACACTAAAGACCAAAAAAAAACCCGC...................................  <  REL606/640156‑640118
...................................CCGCCTCACTATCCGCCCCATTTTTAACGCCTGACTGGC  <  REL606/1245375‑1245341

Base quality scores:  ATCG  < 3 ≤  ATCG  < 4 ≤  ATCG  < 10 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG