New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 370838 =32 (0.570)4 (0.070) 3/64 NT 10.8% intergenic (+30/‑89) phoA/psiF bacterial alkaline phosphatase/hypothetical protein
?REL606 3051517 = 34 (0.550)coding (835/1224 nt) glcF glycolate oxidase iron‑sulfur subunit

CGGTTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGCGCTTTATCGGCATATA  >  REL606/3051482‑3051552
                                   |                                   
cGGTTCCTCGCGCAGAAGTTCGACTAAATCGACCGc                                     <  1:3143898/36‑1 (MQ=255)
  gTTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCa                                   >  1:1424166/1‑36 (MQ=255)
    tCCTCGCGCAGAAGTTNGACNAAATCGACCGCCAGt                                 >  1:1716502/1‑36 (MQ=40)
    tCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGt                                 >  1:4682713/1‑36 (MQ=255)
    tCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGt                                 >  1:6011459/1‑36 (MQ=255)
     ccccgcgCAGAAGTTCGACTAAATCGACCGCCAGtt                                <  1:2610824/33‑1 (MQ=255)
     ccTCGCGAAAAGGTTCGAAAAAACCGACCGCCAGtt                                <  1:6553795/36‑1 (MQ=9)
      cTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTc                               >  1:8137553/1‑36 (MQ=255)
         gcgcAGAAGTTCGACTAAATCGACCGCCAGTTCAct                            >  1:6917198/1‑36 (MQ=255)
         gcgcAGAAGTTCGACTAAATCGACCGCCAGTTCAct                            >  1:4333681/1‑36 (MQ=255)
          cgcAGAAGTTCGACTAAATCGACCGCCAGTTCActg                           >  1:1225775/1‑36 (MQ=255)
           gcAGAAGTTCGACTAAATCGACCGCCAGTTCActga                          >  1:5207557/1‑36 (MQ=255)
           gcAGAAGGTCGACTAAATCGACCGCCAGCTCActga                          >  1:455812/1‑36 (MQ=37)
             aGAAGTTCGACTAAATCGACCGCCAGTTCActgacc                        >  1:3052191/1‑36 (MQ=255)
             aGAAGTTCGACTAAATCGACCGCCAGTTCActgacc                        >  1:6651263/1‑36 (MQ=255)
              aaaGTTCAAAAAAACCGACCGCCAGTTCActgacct                       <  1:4248144/35‑1 (MQ=16)
               aaGTTCGACTAAATCGACCGCCAGTTCActgacctg                      >  1:6248189/1‑36 (MQ=255)
               aaGTTCGACTAAATCGACCGCCAGTTCActgacctg                      >  1:5183972/1‑36 (MQ=255)
               aaGTTCAAAAAAATCGACCGCCAGTTCActgacctg                      <  1:5417235/36‑1 (MQ=21)
               aaGTTCAAAAAAACCGACCGCCAGTTCActgacctg                      <  1:7626334/36‑1 (MQ=16)
                 gTTCGACTAAATCGACCGCCAGTTCActgacctgac                    >  1:6762493/1‑36 (MQ=255)
                  ttCGACTAAATCGACCGCCAGTTCACTGACCTGAcg                   >  1:2156921/1‑36 (MQ=255)
                    caaaaaaaccccccgCCAGTTCACTGACCTGAcgcg                 <  1:2595051‑M2/21‑1 (MQ=255)
                     gACTAAATCGACCGCCAGTTCACTGACCTGACgcgc                >  1:8099714/1‑36 (MQ=255)
                     gACTAAATCGACCGCCAGTTCACTGACCTGACgcgc                >  1:4444925/1‑36 (MQ=255)
                       cTAAATCGACCGCCAGTTCACTGACCTGACGCGCtt              >  1:2508856/1‑36 (MQ=255)
                       aaaaaccacccgCCAGTTCACTGCCCTGACGCGCtt              <  1:660530‑M2/24‑1 (MQ=255)
                       aaaaaCCGACCGCCAGTTCACTGACCTGACGCGCtt              <  1:3458237/34‑1 (MQ=25)
                         aaaTCGACCGCCAGTTCACTGACCTGACGCGCTTTa            >  1:4147969/1‑36 (MQ=255)
                          aaccaaccgCCAGTTCACTGACCTGACGCGCTTTAt           <  1:8073706‑M2/27‑1 (MQ=255)
                          aaTCGACCGCCAGTTCACTGACCTGACGCGCTTTAt           >  1:3723798/1‑36 (MQ=255)
                          aaTCGACCGCCAGTTCACTGACCTGACGCGCTTTAt           >  1:2789635/1‑36 (MQ=255)
                           aTCGACCGCCAGTTCACTGACCTGACGCGCTTTATc          >  1:7907879/1‑36 (MQ=255)
                           aTCGACCGCCAGTTCACTGACCTGACGCGCTTTATc          >  1:4751516/1‑36 (MQ=255)
                            ccccccgCCAGTTCACTGACCTGACGCGCTTTATCg         <  1:4997079‑M2/29‑1 (MQ=255)
                             cGACCGCCAGTTCACTGACCTGACGCGCTTTATCgg        >  1:5852574/1‑36 (MQ=255)
                             cGACCGCCAGTTCACTGACCTGACGCGCTTTATCgg        >  1:6804336/1‑36 (MQ=255)
                              gACCGCCAGTTCACTGACCTGACGCGCTTTATCGGc       >  1:2990310/1‑36 (MQ=255)
                               aCCGCCAGTTCACTGACCTGACGCGCTTTATCGGCa      >  1:7237908/1‑36 (MQ=255)
                                ccgCAAGTTCACTGACCTGACGCGCTTTATCGGCat     <  1:4504355‑M2/33‑1 (MQ=255)
                                 cgCCAGTTCACTGACCTGACGCGCTTTATCGGCata    >  1:7808986‑M2/3‑36 (MQ=255)
                                 cgCCAGTTCACTGACCTGACGCGCTTTATCGGCata    <  1:2392775‑M2/34‑1 (MQ=255)
                                 cgCCAGTTCACTGACCTGACGCGCTTTATCGGCata    >  1:1128895‑M2/3‑36 (MQ=255)
                                  gCCAGTTCACTGACCTGACGCGCTTTATCGGCatat   >  1:6682266‑M2/2‑36 (MQ=255)
                                   ccAGTTCACTGACCTGACGCGCTTTATCGGCAtata  >  1:6784940/1‑36 (MQ=255)
                                   ccAGTTCACTGACCTGACGCGCTTTATCGGCAtata  >  1:1035836/1‑36 (MQ=255)
                                   |                                   
CGGTTCCTCGCGCAGAAGTTCGACTAAATCGACCGCCAGTTCACTGACCTGACGCGCTTTATCGGCATATA  >  REL606/3051482‑3051552

Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 21 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG