Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC REL606 547,700 Δ8,224 bp 100% IS1‑mediated [nmpC][ECB_00513] [nmpC], ybcR, ybcS, ybcT, ybcU, ECB_00510, nohB, ECB_00512, [ECB_00513]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 546958–547700 555923–555877 8178–8966 17 [14] [0] 105 [insB‑6]–[ECB_00513] [insB‑6], insA‑6, nmpC, ybcR, ybcS, ybcT, ybcU, ECB_00510, nohB, ECB_00512, [ECB_00513]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 555924 =0 (0.000)60 (1.120) 39/62 NT 100% coding (1209/2346 nt) ECB_00513 conserved hypothetical protein
?REL606 = 2035093 NA (NA)noncoding (1/768 nt) IS1 repeat region

AACCGAAACCGGTAATGACTCCAACTTATTGATAGTGTTTTAT  >  REL606/546922‑546964
                                   |       
aaccgaaaccgGTAATGACTCCAACTTATTGATAgt         >  1:7634152/1‑36 (MQ=255)
aaccgaaaccgGTAATGACTCCAACTTATTGATAgt         >  1:664198/1‑36 (MQ=255)
aaccgaaaccgGTAATGACTCCAACTTATTGATAgt         <  1:434863/36‑1 (MQ=255)
 accgaaaccgGTAATGACTCCAACTTATTGATAgtg        >  1:2561834/1‑36 (MQ=255)
 accgaaaccgGTAATGACTCCAACTTATTGATAgtg        >  1:519439/1‑36 (MQ=255)
 accgaaaccgGTAATGACTCCAACTTATTGATAgtg        >  1:4987187/1‑36 (MQ=255)
  ccgaaaccgGTAATGACTCCAACTTATTGATAgtgt       <  1:7481087/36‑1 (MQ=255)
  ccgaaaccgGTAATGACTCCAACTTATTGATAgtgt       >  1:703825/1‑36 (MQ=255)
  ccgaaaccgGTAATGACTCCAACTTATTGATAgtgt       <  1:4759259/36‑1 (MQ=255)
  ccgaaaccgGTAATGACTCCAACTTATTGATAgtgt       >  1:3320376/1‑36 (MQ=255)
   cgaaaccgGTAATGACTCCAACTTATTGATAGTGtt      >  1:4039427/1‑36 (MQ=255)
    gaaaccgGTAATGACTCCAACTTATTTATAGTGttt     <  1:4163483/36‑1 (MQ=255)
    gaaaccgGTAATGACTCCAACTTATTGATAGTGttt     >  1:4599076/1‑36 (MQ=40)
     aaaccgGTAATGACTCCAACTTATTGATAGTGtttt    >  1:6215541/1‑36 (MQ=38)
      aaccgGTAATGACTCCAACTTATTGATAGTGTTTTa   <  1:1715076/36‑1 (MQ=35)
       accgGTAATGACTCCAACTTATTGATAGTGTTTTAt  >  1:3742713/1‑36 (MQ=32)
       accgGTAATGACTCCAACTTATTGATAGTGTTTTAt  <  1:7050237/36‑1 (MQ=32)
                                   |       
AACCGAAACCGGTAATGACTCCAACTTATTGATAGTGTTTTAT  >  REL606/546922‑546964

Base quality scores:  ATCG  < 3 ≤  ATCG  < 22 ≤  ATCG  < 30 ≤  ATCG  < 35 ≤  ATCG  < 37 ≤  ATCG