New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1340206 =27 (0.470)6 (0.100) 3/70 NT 15.6% intergenic (+107/‑86) yciM/pyrF hypothetical protein/orotidine 5'‑phosphate decarboxylase
?REL606 3170213 = 38 (0.660)coding (104/1005 nt) ygjR predicted NAD(P)‑binding dehydrogenase

GGAAATAAAAAATTAAC..................................  <  REL606/1340222‑1340206
.................CCGCCGTATATTCCCGCAGCCTTGAACAGGCCCA  >  REL606/3170213‑3170246
                                                   
GGAAAAAAAAAATTAACCCGCCGTATATTCCCGCAG                 <  1:3623525/36‑1 (MQ=255)
 GAAAAAAAAAATTAACCCGCCGTATATTCCCGCAGC                <  1:3138902/36‑1 (MQ=255)
        AAAATTAAACCGCCGTATATTCCCGCAGCCTTGAAC         <  1:6781589/36‑1 (MQ=255)
            TTAAACCGCCGTATATTCCCGCAGCCTTGAACAGGC     <  1:158885/36‑1 (MQ=255)
             tacCCCGCCGTATATTCCCGCAGCCTTGAACAGGCC    <  1:6006724/33‑1 (MQ=255)
               gCCCGCCGTATATTCCCGCAGCCTTGAACAGGCCCA  <  1:3028033/35‑1 (MQ=255)
                                                   
GGAAATAAAAAATTAAC..................................  <  REL606/1340222‑1340206
.................CCGCCGTATATTCCCGCAGCCTTGAACAGGCCCA  >  REL606/3170213‑3170246

Base quality scores:  ATCG  < 3 ≤  ATCG  < 6 ≤  ATCG  < 15 ≤  ATCG  < 30 ≤  ATCG  < 37 ≤  ATCG