New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1286705 =24 (0.490)7 (0.140) 4/56 NT 21.2% intergenic (+29/‑154) narI/ECB_01206 nitrate reductase 1, gamma (cytochrome b(NR)) subunit/hypothetical protein
?REL606 = 2173876 28 (0.460)coding (454/1716 nt) dld D‑lactate dehydrogenase, FAD‑binding, NADH independent

CAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTC  >  REL606/2173841‑2173907
                                   |                               
cAGTGATTGGATCATCGTGTATAGGCGCATCGGTCa                                 <  1:1953071/36‑1 (MQ=255)
 aGTGATTGGATCATCGTGTATAGGCGCATCGGTCAt                                >  1:7477577‑M2/1‑35 (MQ=255)
 aGTGATTGGATCATCGTGTATAGGCGCATCGGTCAt                                >  1:4917567‑M2/1‑35 (MQ=255)
 aGTGATTGGATCATCGTGTATAGGCGCATCGGTCAt                                >  1:4580573‑M2/1‑35 (MQ=255)
 aGTGATTGGATCATCGTGTATAGGCGCATCGGTCAt                                <  1:3836962‑M2/36‑2 (MQ=255)
  gTGATTGGATCATCGTGTATAGGCGCATCGGTCAtc                               >  1:3194634‑M2/1‑34 (MQ=255)
  gTGATTGGATCATCGTGTATAGGCGCATCGGTCAtc                               >  1:1846908‑M2/1‑34 (MQ=255)
  gTGATTGGATCATCGTGTATAGGCGCATCGGTCAtc                               >  1:1032729‑M2/1‑34 (MQ=255)
   tGATTGGATCATCGTGTATAGGCGCATCGGTCAtcg                              >  1:2606013‑M2/1‑33 (MQ=255)
    gATTGGATCATCGTGTATAGGCGCATCGGTCAtcgg                             >  1:6031488‑M2/1‑32 (MQ=255)
    gATTGGATCATCGTGTATAGGCGCATCGGTCAtcgg                             <  1:6413178‑M2/36‑5 (MQ=255)
     aTTGGATCATCGTGTATAGGCGCATCGGTCAtcggc                            >  1:5020251‑M2/1‑31 (MQ=255)
     aTTGGATCATCGTGTATAGGCGCATCGGTCAtcggc                            <  1:6471980‑M2/36‑6 (MQ=255)
      ttGGATCATCGTGTATAGGCGCATCGGTCAtcggcg                           >  1:7397349‑M2/1‑30 (MQ=255)
      ttGGATCATCGTGTATAGGCGCAACGGTCAtcggcg                           >  1:1503097‑M2/1‑30 (MQ=255)
       tGGATCATCGTGTATAGGCGCATCGGTCAtcggcgg                          >  1:2681083‑M2/1‑29 (MQ=255)
       tGGATCATCGTGTATAGGCGCATCGGTCAtcggcgg                          >  1:1036909‑M2/1‑29 (MQ=255)
        ggATCATCGTGTATAGGCGCATCGGTCATCGGCGGt                         <  1:6471677/36‑1 (MQ=255)
          atcatcGTGTATAGGCGCATCGGTCAtcggcggggt                       <  1:6465988‑M2/36‑11 (MQ=255)
          atcatcGTGTATAGGCGCATCGGTCATCGGCGGTAt                       <  1:1207564/36‑1 (MQ=255)
           tcatcGTGTATAGTCGCATCGGTCATCGGCGGTAtt                      <  1:2462788/36‑1 (MQ=255)
           tcatcGTGTATAGGCGCATCGGTCAtcggcgggtcg                      <  1:1486520‑M2/36‑12 (MQ=255)
           tcatcGTGTATAGGCGCATCGGTCATCGGCGGTAtt                      <  1:3344852/36‑1 (MQ=255)
            catcGTGTATAGGCGCATCGGTCAtcggcgggggtt                     <  1:1730600‑M2/36‑13 (MQ=255)
            catcGTGTATAGGCGCATCGGTCATCGGCGGTAttt                     <  1:814636/36‑1 (MQ=255)
            catcGTGTATAGGCGCATCGGTCATCGGCGGTAttt                     <  1:888164/36‑1 (MQ=255)
            catcGTGTATAGGCGCATCGGTCATCGGCGGTAttt                     <  1:980052/36‑1 (MQ=255)
             atcGTGTATAGGCGCATCGGTCAtcggcggggtttt                    <  1:6312677‑M2/36‑14 (MQ=255)
              tcGTGTATAGGCGCATCGGTCATCGGCGGTATTCGt                   <  1:4333594/36‑1 (MQ=255)
               cGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTa                  <  1:5302776/36‑1 (MQ=255)
               cGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTa                  <  1:3139082/36‑1 (MQ=255)
               cGTGTATAGGCGCATCGGTCATAGGCGGTGtttttt                  >  1:56498/1‑33 (MQ=25)
                gtgtATAGGCGCATCGGTCAtcggcgggtttttttt                 <  1:1867240‑M2/36‑17 (MQ=255)
                 tgtATAGGCGCATCGGTCAtcggcggggttttttta                <  1:1555632‑M2/36‑18 (MQ=255)
                 tgtATAGGCGCATCGGTCATCGGCGGTATTTGTaac                <  1:6893841/36‑1 (MQ=255)
                  gtATAGGCGCATCGGTCAtcggcggggtttttttta               <  1:3361626‑M2/36‑19 (MQ=255)
                  gtATAGGCGCATCGGTCATCGGCGGTATTTGTaaca               <  1:2360442/36‑1 (MQ=255)
                  gtATAGGCGCATCGGACATCGGCGGTATTTGTaaca               <  1:3705383/36‑1 (MQ=255)
                   tataGGCGCATCGGTCATCGGCGGTATTTGTaacaa              <  1:4053183/36‑1 (MQ=255)
                      aGGCGCATCGGTCATCGGCGGTATTTGTAACAACTc           <  1:1840924/36‑1 (MQ=255)
                      aGGCGCATCGGTCATCGGCGGTATTTGTAACAACTc           <  1:7419238/36‑1 (MQ=255)
                      aGGCGCATCGGTCATCGGCGGTATTTGTAACAACTc           <  1:3348588/36‑1 (MQ=255)
                       ggCGCATCGGTCATCGGCGGTATTTGTAACAACTcc          <  1:7043598/36‑1 (MQ=255)
                       ggCGCATCGGTCATCGGCGGTATTTGTAACAACTcc          <  1:912102/36‑1 (MQ=255)
                        gcgcATCGGTCATCGGCGGTATTTGTAACAACTCcg         <  1:6207279/36‑1 (MQ=255)
                        gcgcATCGGTCATCGGCGGGGTTTTTTACAACTccc         >  1:7055169/1‑35 (MQ=12)
                          gcATCGGTCATCGGCGGTTTTTTTTACAAATcctcc       >  1:651827/1‑33 (MQ=12)
                          gcATCGGTCATCGGCGGTATTTGTAACAACTCcggc       <  1:1856486/36‑1 (MQ=255)
                            aTCGGTCATCGGCGGTATTTGTAACAACTCcggcgg     <  1:581322/36‑1 (MQ=255)
                              cagTCAGCGGTGGTATATGTAACACCTCCGGCGGCt   <  1:2933853/34‑1 (MQ=16)
                              cGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCt   <  1:596278/36‑1 (MQ=255)
                               ggTCATCGGCGGTATTTGTAACAACTCCGGCGGCTc  <  1:6006792/36‑1 (MQ=255)
                                   |                               
CAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTC  >  REL606/2173841‑2173907

Base quality scores:  ATCG  < 3 ≤  ATCG  < 10 ≤  ATCG  < 22 ≤  ATCG  < 31 ≤  ATCG  < 37 ≤  ATCG