Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC REL606 3,894,997 Δ6,934 bp 100% IS150‑mediated rbsD[yieO] rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ REL606 3894997 3901930 6934 54 [3] [0] 44 rbsD–[yieO] rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 3894996NA (NA)37 (0.670) 27/64 NT 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 3901931 = 0 (0.000)coding (489/1428 nt) yieO predicted multidrug or homocysteine efflux system

CCTATGGGGATATTGATTAAAAATATCCAGTGCCAGGTTGCCCAGGTGACCAGCACGCCGCCAAGAACGGG  >  REL606/3901896‑3901966
                                   |                                   
cgtgtttaactgtccaactttttggggtcagtacag                                     <  1:2364375‑M2/1‑1 (MQ=255)
  tgtttaactgtccaactttttggggtcagtacaGGt                                   <  1:1204577‑M2/3‑1 (MQ=255)
  tgtttaactgtccaactttttggggtcagtacaGGt                                   <  1:2697924‑M2/3‑1 (MQ=255)
      taactgtccaactttttggggtcagtacaGGTTGcc                               <  1:24570‑M2/7‑1 (MQ=255)
      taactgtccaactttttggggtcagtacaGGTTGcc                               >  1:7447282‑M2/30‑36 (MQ=255)
       aactgtccaactttttggggtcagtacaGGTTgcca                              >  1:6944651‑M2/29‑35 (MQ=255)
       aactgtccaactttttggggtcagtacaGGTTGccc                              <  1:1530738‑M2/8‑1 (MQ=255)
       aactgtccaactttttggggtcagtacaGGTTGccc                              >  1:3832823‑M2/29‑36 (MQ=255)
       aactgtccaactttttggggtcagtacaGGTTGccc                              >  1:3425479‑M2/29‑36 (MQ=255)
        actgtccaactttttggggtcagtacaGGTTGCCCa                             >  1:6861061‑M2/28‑36 (MQ=255)
        actgtccaactttttggggtcagtacaGGTTGCCCa                             <  1:3216303‑M2/9‑1 (MQ=255)
         ctgtccaactttttggggtcagtacaGGTTGCCCAg                            <  1:6193507‑M2/10‑1 (MQ=255)
           gtccaactttttggggtcagtacaGGTTGCCCAGGt                          >  1:4716605‑M2/25‑36 (MQ=255)
            tccaactttttggggtcagtacaGGTTGCCCAGGTg                         <  1:6601788‑M2/13‑1 (MQ=255)
            tccaactttttggggtcagtacaGGTTGCCCAGGTg                         <  1:1182490‑M2/13‑1 (MQ=255)
               aactttttggggtcagtacaGGTTGCCCAGGTGAcc                      <  1:3280724‑M2/16‑1 (MQ=255)
                 ctttttggggtcagtacaGGTTGCCCAGGTGACCAg                    >  1:880125‑M2/19‑36 (MQ=255)
                  tttttggggtcagtacaGGTTGCCCAGGTGACCAGc                   >  1:2898066‑M2/18‑36 (MQ=255)
                  tttttggggtcagtacaGGTTGCCCAGGTGACCAGc                   <  1:2095577‑M2/19‑1 (MQ=255)
                   ttttggggtcagtacaGGTTGCCCAGGTGACCAGCa                  <  1:934093‑M2/20‑1 (MQ=255)
                    tttggggtcagtacaGGTTGCCCAGGTGACCAGCAc                 <  1:2344073‑M2/21‑1 (MQ=255)
                      tggggtcagtacaGGTTGCCCAGGTGATCAGCAcgc               <  1:5586980‑M2/23‑1 (MQ=255)
                      tggggtcagtacaGGTTGCCCAGGTGACCAGCAcgc               <  1:178612‑M2/23‑1 (MQ=255)
                      tggggtcagtacaGGTTGCCCAGGTGACCAGCAcgc               >  1:6120011‑M2/14‑36 (MQ=255)
                       ggggtcagtacaGGTTGCCCAGGTGACCAGCAcgcc              <  1:4938404‑M2/24‑1 (MQ=255)
                       ggggtcagtacaGGTTGCCCAGGTGACCAGCAcgcc              <  1:2951071‑M2/24‑1 (MQ=255)
                       ggggtcagtacaGGTTGCCCAGGTGACCAGCAcgcc              >  1:7129715‑M2/13‑36 (MQ=255)
                        gggtcagtacaGGTTGCCCAGGTGACCAGCAcgccg             >  1:6339565‑M2/12‑36 (MQ=255)
                          gtcagtacaGGTTGCCCAGGTGACCAGCACgccgcc           <  1:3540023‑M2/27‑1 (MQ=255)
                          gtcagtacaGGTTGCCCAGGTGACCAGCACgccgcc           <  1:6410723‑M2/27‑1 (MQ=255)
                          gtcagtacaGGTTGCCCAGGTGACCAGCACgccgcc           >  1:5843826‑M2/10‑36 (MQ=255)
                             agtacaGGTTGCCCAGGTGACCAGCACGCCGCCAAg        <  1:4545028‑M2/30‑1 (MQ=255)
                             agtacaGGTTGCCCAGGTGACCAGCACGCCGCCAAg        <  1:4306323‑M2/30‑1 (MQ=255)
                             agtacaGGTTGCCCAGGTGACCAGCACGCCGCCAAg        <  1:4718499‑M2/30‑1 (MQ=255)
                               tacaGGTTGCCCAGGTGACCAGCACGCCGCCAAGaa      >  1:3241821‑M2/5‑36 (MQ=255)
                                acaGGTTGCCCAGGTGACCAGCACGCCGCCAAGAAc     >  1:4986518‑M2/4‑36 (MQ=255)
                                acaGGTTGCCCAGGTGACCAGCACGCCGCCAAGAAc     >  1:7877541‑M2/4‑36 (MQ=255)
                                acaGGTTGCCCAGGTGACCAGCACGCCGCCAAGAAc     <  1:4427222‑M2/33‑1 (MQ=255)
                                 caGGTTGCCCAGGTGACCAGCACGCCGCCAAGAACg    <  1:4312572‑M2/34‑1 (MQ=255)
                                 caGGTTGCCCAGGTGACCAGCACGCCGCCAAGAACg    >  1:5133658‑M2/3‑36 (MQ=255)
                                  aGGTTGCCCAGGTGACCAGCACGCCGCCAAGAACgg   >  1:3999297‑M2/2‑36 (MQ=255)
                                  aGGTTGCCCAGGTGACCAGCACGCCGCCAAGAACgg   <  1:5549332‑M2/35‑1 (MQ=255)
                                   GGTTGCCCAGGTGACCAGCACGCCGCCAAGAACggg  >  1:4611561‑M2/1‑36 (MQ=255)
                                   GGTTGCCCAGGTGACCAGCACGCCGCCAAGAACggg  >  1:6005133‑M2/1‑36 (MQ=255)
                                   |                                   
CCTATGGGGATATTGATTAAAAATATCCAGTGCCAGGTTGCCCAGGTGACCAGCACGCCGCCAAGAACGGG  >  REL606/3901896‑3901966

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 26 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG