New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 789257 | 44 (0.960) | 6 (0.130) | 4/56 | NT | 16.7% | intergenic (‑235/+241) | ECB_00726/ECB_00727 | integrase/phage related protein |
? | REL606 | 2994085 = | 16 (0.280) | coding (731/2136 nt) | speC | ornithine decarboxylase, constitutive |
ATCGCAAAGTCTCCGCAATTACACGCAAGAAAAAACCGCCA.................................. > REL606/789217‑789257
..................................ACCGCCAATGAAACCAAACGGGTTACGTGAAGCTTCCAGAT > REL606/2994085‑2994118
GCAAAAAAAAACCGCCAATGAAACCAAACGGGTTAC < 1:167548/36‑1 (MQ=0)
CAAAAAAAAACCGCCAATGAAACCAAACGGGTTACG < 1:2100222/36‑1 (MQ=0)
aaAAAAAACCGCCAATGAAACCAAACGGGTTACGTG < 1:6271925/34‑1 (MQ=1)
AAAAAACCGCCAATGAAACCAAACGGGTTACGTGAA < 1:3371292/36‑1 (MQ=1)
AAAAAACCGCCAATGAAACCAAACGGGTTACGTGAA < 1:5698475/36‑1 (MQ=1)
AACCGCCAATGAAACCAAACGGGTTACGTGAAGCTT < 1:7406/36‑1 (MQ=1)
ATCGCAAAGTCTCCGCAATTACACGCAAGAAAAAACCGCCA.................................. > REL606/789217‑789257
..................................ACCGCCAATGAAACCAAACGGGTTACGTGAAGCTTCCAGAT > REL606/2994085‑2994118
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 6 ≤
ATCG
< 13 ≤
ATCG
< 30 ≤
ATCG
< 37 ≤
ATCG
|