New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1286706 =14 (0.380)9 (0.240) 4/58 NT 34.6% intergenic (+30/‑153) narI/ECB_01206 nitrate reductase 1, gamma (cytochrome b(NR)) subunit/hypothetical protein
?REL606 = 2780684 20 (0.450)intergenic (‑286/‑30) cysJ/ygcM sulfite reductase, alpha subunit, flavoprotein/6‑pyruvoyl tetrahydrobiopterin synthase (PTPS)

GACAACTCACCCCGCACCGTGCCCATAAAAAAACCCCGCCG...................................  <  REL606/1286746‑1286706
...................................CCGCCGTAGAGTACCGGAAAGGCTGTTTTTTCGCATTATCT  <  REL606/2780684‑2780650
                                                                            
                         aAAAAAAAACCCGCCGTAGAGTACCGGAAAGGCTGT                 <  1:2890449/35‑1 (MQ=255)
                          AAAAAAACCCCGCCGTAGAGTACCGGAAAGGCTGTT                <  1:4675942/36‑1 (MQ=255)
                           AAAAAACCCCGCCGTAGAGTACCGGAAAGGCTGTTT               <  1:1388866/36‑1 (MQ=255)
                            cAAAAACCCGCCGTAGAGTACCGGAAAGGCTGTTTT              <  1:5653459/35‑1 (MQ=255)
                              AAACCCCGCCGTAGAGTACCGGAAAGGCTGTTTTTT            <  1:773203/36‑1 (MQ=255)
                               aagCCCGCCGTAGAGTACCGGAAAGGCTGTTTTTTC           <  1:4749798/33‑1 (MQ=255)
                               aaaCCCGCCGTAGAGTACCGGAAAGGCTGTTTTTTC           <  1:132988/33‑1 (MQ=255)
                                  CCCGCCGTAGAGTACCGGAAAGGCTGTTTTTTCGCA        <  1:4603355/36‑1 (MQ=255)
                                  CCCGCCGTAGAGTACCGGAAAGGCTGTTTTTTCGCA        <  1:4737515/36‑1 (MQ=255)
                                                                            
GACAACTCACCCCGCACCGTGCCCATAAAAAAACCCCGCCG...................................  <  REL606/1286746‑1286706
...................................CCGCCGTAGAGTACCGGAAAGGCTGTTTTTTCGCATTATCT  <  REL606/2780684‑2780650

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 16 ≤  ATCG  < 29 ≤  ATCG  < 37 ≤  ATCG