New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 287442118 (0.340)9 (0.170) 4/60 NT 24.3% coding (780/936 nt) lysR DNA‑binding transcriptional dual regulator
?REL606 3419921 = 38 (0.610)coding (282/573 nt) ppiA peptidyl‑prolyl cis‑trans isomerase A (rotamase A)

CACTAGATTATGCGGCAAGCGGTTTAGTGGTGCGGCGG...................................  >  REL606/2874384‑2874421
.................................GGCGGGTTTGGTTTTTTCTGCTGCATCTGCTCGGTGAAAC  >  REL606/3419921‑3419955
                                                                         
   TAGATTATGCGGCAAGCGGTTTAGTGGTGCGGCGGG                                    >  1:6786511/1‑36 (MQ=255)
   TAGATTATGCGGCAAGCGGTTTAGTGGTGCGGCGGG                                    >  1:816826/1‑36 (MQ=255)
     GATTATGCGGCAAGCGGTTTAGTGGTGCGGCGGGgt                                  >  1:2219883/1‑34 (MQ=255)
       TTATGCGGCAAGCGGTTTAGTGGTGCGGCGGGTggg                                >  1:2067990/1‑33 (MQ=255)
       TTATGCGGCAAGCGGTTTAGTGGTGCGGCGGGTTTG                                >  1:5245034/1‑36 (MQ=255)
        TATGCGGCAAGCGGTTTAGTGGTGCGGCGGGTTTGt                               >  1:7528231/1‑35 (MQ=255)
         ATGCGGCAAGCGGTTTAGTGGTGCGGCGGGTTTGtg                              >  1:2960693/1‑34 (MQ=255)
          TGCGGCAAGCGGTTTAGTGGTGCGGCGGGTTTGGTT                             >  1:897566/1‑36 (MQ=255)
            CGGCAAGCGGTTTAGTGGTGCGGCGGGTTTGGTTTT                           >  1:3865290/1‑36 (MQ=255)
                                                                         
CACTAGATTATGCGGCAAGCGGTTTAGTGGTGCGGCGG...................................  >  REL606/2874384‑2874421
.................................GGCGGGTTTGGTTTTTTCTGCTGCATCTGCTCGGTGAAAC  >  REL606/3419921‑3419955

Base quality scores:  ATCG  < 3 ≤  ATCG  < 4 ≤  ATCG  < 14 ≤  ATCG  < 29 ≤  ATCG  < 37 ≤  ATCG