New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1946057 =38 (0.780)8 (0.160) 3/56 NT 22.5% coding (151/390 nt) cheY chemotaxis regulator transmitting signal to flagellar motor component
?REL606 = 2574503 17 (0.280)intergenic (+345/+473) sseA/sseB 3‑mercaptopyruvate sulfurtransferase/rhodanase‑like enzyme, sulfur transfer from thiosulfate

AAGATGGCGTCGACGCTCTCAATAAGTTGCAGGCAGGCGGTT..........  <  REL606/1946098‑1946057
...................................GGCGGTTTTTTGTTTTT  <  REL606/2574503‑2574494
                                                    
        GTCGACGCTCTCAATAAGTTGCAGGCAGGCGGTTTT          >  1:832361/1‑36 (MQ=255)
        GTCGACGCTCTCAATAAGTTGCAGGCAGGCGGGTTT          >  1:1453534/1‑36 (MQ=255)
        GTCGACGCTCTCAATAAGTTGCAGGCAGGCGGGTTT          >  1:5471989/1‑36 (MQ=255)
          CGACGCTCTCAATAAGTTGCAGGCAGGCGGTTTTTg        >  1:6513445/1‑35 (MQ=255)
          CGACGCTCTCAATAAGTTGCAGGCAGGCGGTTGTTg        >  1:7475400/1‑35 (MQ=255)
               CTCTCAATAAGTTGCAGGCAGGCGGTTTTTTGTTTT   >  1:6828849/1‑36 (MQ=255)
                TCTCAATAAGTTGCAGGCAGGCGGTTTTTTATTTTT  >  1:7310442/1‑36 (MQ=255)
                TCTCAATAAGTTGCAGGCAGGCGGTTTTTGGTTTTT  >  1:7834296/1‑36 (MQ=255)
                                                    
AAGATGGCGTCGACGCTCTCAATAAGTTGCAGGCAGGCGGTT..........  <  REL606/1946098‑1946057
...................................GGCGGTTTTTTGTTTTT  <  REL606/2574503‑2574494

Base quality scores:  ATCG  < 3 ≤  ATCG  < 6 ≤  ATCG  < 18 ≤  ATCG  < 32 ≤  ATCG  < 37 ≤  ATCG