Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
JC | REL606 | 980,293 | 3 bp x 2 | 7.6% | duplication | rpsA → | 30S ribosomal protein S1 |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 980293 = | 62 (1.220) | 5 (0.100) | 5/62 | NT | 7.6% | coding (1207/1674 nt) | rpsA | 30S ribosomal protein S1 |
? | REL606 | = 980295 | 60 (1.040) | coding (1209/1674 nt) | rpsA | 30S ribosomal protein S1 |
GATTTCGTCGCCTTTTTTGTATTCACGAACTGCTTCTTC................................... < REL606/980331‑980293
...................................CTTCTTCGCCTGCAACGTTCCAGGAGATGTCAGACAGGT < REL606/980295‑980261
GTCGCCTTTTTTGTATTCACGAACTGCTTCTTCTTC < 1:5908452/36‑1 (MQ=255)
TTTGTATTCACGAACTGCTTCTTCTTCGCCTGCAAC > 1:2409065/1‑36 (MQ=255)
TTGTATTCACGAACTGCTTCTTCTTCGCCTGCAACG < 1:1958077/36‑1 (MQ=255)
GTATTCACGAACTGCTTCTTCTTCGCCTGCAACGTT < 1:3199481/36‑1 (MQ=255)
TCTTCTTCGCCTGCAACGTTCCAGGAGATGTCAGAC < 1:86322/36‑1 (MQ=255)
GATTTCGTCGCCTTTTTTGTATTCACGAACTGCTTCTTC................................... < REL606/980331‑980293
...................................CTTCTTCGCCTGCAACGTTCCAGGAGATGTCAGACAGGT < REL606/980295‑980261
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 16 ≤
ATCG
< 24 ≤
ATCG
< 34 ≤
ATCG
< 37 ≤
ATCG
|