New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 1241529 =22 (0.460)4 (0.080) 3/56 NT 16.0% coding (693/1737 nt) ycgO potassium/proton antiporter
?REL606 = 2574504 20 (0.330)intergenic (+346/+472) sseA/sseB 3‑mercaptopyruvate sulfurtransferase/rhodanase‑like enzyme, sulfur transfer from thiosulfate

CTGCCCGCCGGATTATATCCATTGCTGGCATTAAGTGGCGGT............  <  REL606/1241570‑1241529
...................................TGGCGGTTTTTTGTTTTTT  <  REL606/2574504‑2574493
                                                      
          GATTATATCCATTGCTGGCATTAAGTGGCGGTTTTT          >  1:7910257/1‑36 (MQ=255)
                ATCCATTGCTGGCATTAAGTGGCGGTTTTTTTTTTT    >  1:1434787/1‑36 (MQ=255)
                ATCCATTGCTGGCATTAAGTGGCGGTTTTTTTTTTT    >  1:3870186/1‑36 (MQ=255)
                  CCATTGCTGGCATTAAGTGGCGGTTTTTTTTTTTTT  >  1:643491/1‑36 (MQ=255)
                                                      
CTGCCCGCCGGATTATATCCATTGCTGGCATTAAGTGGCGGT............  <  REL606/1241570‑1241529
...................................TGGCGGTTTTTTGTTTTTT  <  REL606/2574504‑2574493

Base quality scores:  ATCG  < 3 ≤  ATCG  < 11 ≤  ATCG  < 23 ≤  ATCG  < 33 ≤  ATCG  < 37 ≤  ATCG